Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq474 113 4e-20 seq792 104 2e-17 seq177 98.7 1e-15 seq406 96.9 3e-15 >seq474 Length=16299 Score = 113 bits (124), Expect = 4e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | |||||||||||||| || ||| | || Sbjct 151 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTTCCGGCGAAGAT 209 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 210 CAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 269 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || ||||| || || ||||| Sbjct 270 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 329 Query 133652 A 133652 | Sbjct 330 A 330 >seq792 Length=9982 Score = 104 bits (114), Expect = 2e-17 Identities = 282/427 (66%), Gaps = 11/427 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || |||||||| ||||| || ||||| | | || || | Sbjct 8213 CTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTC 8154 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | || || ||||| ||| | ||| | || || || Sbjct 8153 CATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGTAG 8094 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529 ||||| || || || ||||| |||| |||||| || || | ||||||||| || | | Sbjct 8093 ACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTG-GAGTTCATGCCGAGGAGAG 8035 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG- 120588 | |||| ||| || | ||||||||||||||| | || ||||| ||| ||| Sbjct 8034 CACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATGT 7975 Query 120589 --GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | | || | | || || |||| | | || | | | | || ||| | Sbjct 7974 CCTCAACCACCTTCTTGCTAGGGCGGTTGT-TGAGGTGAGAGAACAG-----CAAGCAGG 7921 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||| || ||||| || || || || ||||||||| || || || || | Sbjct 7920 CAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAG 7861 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||| | ||| | |||| | |||| || | ||||||| ||| || || || | | Sbjct 7860 GCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATAC 7801 Query 120767 CCTCCAC 120773 |||| || Sbjct 7800 CCTCAAC 7794 >seq177 Length=30549 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||| | ||| |||| || |||| || ||||||||||||||| || ||| ||| Sbjct 4636 GGCTTCCACATCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCTGCTGGCCCCCAC 4577 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || || | | | || || ||||| |||||| Sbjct 4576 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCTGAGGATGAGGTCCGCCACGTTGGTGAC 4517 Query 116596 CTGGGCAAC 116604 ||||| ||| Sbjct 4516 CTGGGAAAC 4508 >seq406 Length=19123 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529 || ||||| || ||||| ||| | |||| | || || ||||| || || ||| | Sbjct 3066 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 3125 Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || || || || |||||||| |||||| ||||| | Sbjct 3126 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTG 3185 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||||| | | ||| || || | |||| ||| || || || |||||||| ||| Sbjct 3186 TCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACG 3245 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 3246 AAGATCTGCAT 3256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483399106491600