Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq376 122 2e-22 seq792 98.7 2e-15 >seq376 Length=20092 Score = 122 bits (134), Expect = 2e-22 Identities = 444/692 (64%), Gaps = 5/692 (1%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| |||||||||||||| ||||| ||| |||| || | ||| |||||||| || | Sbjct 2492 ACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGCAAGGTTG 2433 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 || ||||| |||||| | | | |||||||| |||| ||||| || |||| ||| Sbjct 2432 CCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAATGACATTG 2373 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481 | | ||||| || | | | | ||| | | |||||| | || | Sbjct 2372 AGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCA 2313 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 | || || || || || || || |||| || ||||| | | | || | Sbjct 2312 CTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGA 2253 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601 | || || ||||| || || || || | || || |||| | ||||| || | Sbjct 2252 AGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGA 2193 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | || || |||||| | |||| ||| ||||| | | ||| | | || | Sbjct 2192 CTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTTACATTGGCG 2133 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || || | || | |||| ||||||| ||| | | || ||||| ||||||| | Sbjct 2132 GTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTA 2073 Query 110722 AATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTT 110778 ||| || | || ||||| || | | || ||||||| || ||||| || |||| Sbjct 2072 GATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATCTGGAGCCTT 2013 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| || ||| | ||||| ||||| || || ||||| || || ||| |||||| | Sbjct 2012 GGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGAAGTCA 1953 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| |||||||| || || || | |||| | | ||| | |||||||| || ||| | | Sbjct 1952 GAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGGGTTGAGG 1893 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTT-CTCCTGGTCTATCTGATGTATAT 110957 || || ||| | || | || ||| | || | ||||| | ||||||| || Sbjct 1892 CCAACGGTGACTGGACCCTCTTCTGCCCT-AGCGAGGCCCCTGGCTTGGCTGATGTCTAC 1834 Query 110958 GGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 || | ||||| || | ||||||||||| || Sbjct 1833 GGCGACGAGTTCGATGCTCTTTACGAAAAGTA 1802 >seq792 Length=9982 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/225 (71%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842 || || |||||| ||| ||||| || |||||||| | | ||||| || ||| | Sbjct 7699 AAGTTCCCTGCA-TTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAA 7757 Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG- 131901 ||| ||| | | | || |||||||| ||| |||||| ||||| || || || || Sbjct 7758 TCTACCTTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGC 7817 Query 131902 TGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTC 131961 | |||| | | ||||| ||||| ||||||||||| |||||||||| ||| | || || Sbjct 7818 TCCTTTGCCT-CGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTC 7876 Query 131962 CAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 ||| | ||||||| | ||||| | | || ||||| ||||| Sbjct 7877 CAACGAGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGC 7921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186758210319990