Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq376 170 3e-37 >seq376 Length=20092 Score = 170 bits (188), Expect = 3e-37 Identities = 581/898 (65%), Gaps = 8/898 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| || || || | |||||| |||| ||||| || | || || | | | | Sbjct 1820 TCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCGCTAGGGCAGAAGAGGGTC 1879 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | ||| ||| || ||||| || ||||| ||| |||| ||||| || Sbjct 1880 CAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAC 1939 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 | ||| | | ||| |||||| ||||| || || || || | ||||| | Sbjct 1940 AAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAG 1999 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| || ||||| || || ||||| || || | | || || || || ||||| ||| Sbjct 2000 ACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCC 2059 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | |||||| ||||||||||| | || | |||||| |||| ||| ||||| ||| Sbjct 2060 TGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGAT 2119 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||| || || ||| ||| ||| | || ||||| | | ||||| Sbjct 2120 GAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCA 2179 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTC 69935 || || || || | || || || | ||||| |||| |||| |||||| || || ||||| Sbjct 2180 ATACCACCGGCAGTCTTGGAAATCATAGCAC-ACGTCTTCAGTGTGTCGTAGATGCCCTC 2238 Query 69936 TATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCC 69995 ||||| || || |||||| || | || ||| | || ||| | || || || Sbjct 2239 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACC 2298 Query 69996 CGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT 70055 ||||| || | || || || || || ||||| | || | || | || ||||| || Sbjct 2299 AGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGT 2358 Query 70056 TTCAATAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATA 70113 ||||| || |||| || || || |||||||| | || |||||||||| | Sbjct 2359 TTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGG 2416 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 || || || || || | || ||| | ||| ||||| || || || ||| Sbjct 2417 TGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTT 2476 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233 || || ||||| |||||||| |||||| | ||||| | |||| | || || || | | Sbjct 2477 TTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCTCA 2536 Query 70234 TCCTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAATCGGAGATCGTTTACC 70292 ||| || ||| | || || | |||| | |||||| || |||| || Sbjct 2537 TCCGCATGTTTCATGACGAT-TTCATATGTTTCTTTTGAGATCATAGGAGCAGACTTCTT 2595 Query 70293 ATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGT 70352 || || || || ||||||| | | | |||| || || | || | || |||| Sbjct 2596 GTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTTGT 2655 Query 70353 TTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 | |||||| | || || | ||||| | || || || ||||||||||| |||||| Sbjct 2656 CTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 2713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686877974967600