Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq792 156 5e-33 seq376 136 5e-27 >seq792 Length=9982 Score = 156 bits (172), Expect = 5e-33 Identities = 310/457 (68%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || |||||||| |||||||| ||||| || | | | |||| |||||| Sbjct 8209 TAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATG 8150 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGC-ACTCCAATCTGTTTGAGG 129841 ||||| || ||||| | |||| | | ||| || | | | | | || Sbjct 8149 AAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACCAGT------ 8096 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 ||||| || | ||| | ||||| |||| ||||| | ||||||||| |||| ||| Sbjct 8095 AGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGA 8036 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 ||| || || || || | |||| ||||||||||| | ||||| || | |||| Sbjct 8035 GCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATG 7976 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018 | | || || | ||| ||| | | ||| | || ||| || |||| Sbjct 7975 TCCTCAACCACCTTCTTGCTAGGGCGGTTGTTGAGGTGAGA---GAACAGCAAGCAGGCA 7919 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || ||| |||||||| |||||||||||||| || || |||||| ||||| ||| Sbjct 7918 AAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGC 7859 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| |||| ||| ||||||||||| ||||| ||| Sbjct 7858 ATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCC 7799 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||| ||||| || | |||||| | ||||||| Sbjct 7798 TCAACAGCAGCGAAAGCTACGAGACGTTGGGCAAAGG 7762 >seq376 Length=20092 Score = 136 bits (150), Expect = 5e-27 Identities = 412/629 (66%), Gaps = 13/629 (2%) Strand=Plus/Plus Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996 ||||||| ||| || || || ||||| || || | | || | | || || |||| Sbjct 1801 GTACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTC 1860 Query 118997 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056 ||||||||||| | ||| | ||| ||||||||||||||||||| || || || Sbjct 1861 GCTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGG 1920 Query 119057 GATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 119116 ||||||| || |||| | ||| ||| | ||||||| | || || || ||| Sbjct 1921 AGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACG 1980 Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176 | ||||| || || | || ||| | |||||| || ||||| || | || | || | | Sbjct 1981 GAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CAC 2039 Query 119177 CTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 || |||| ||| |||||| || || || |||||| || || || || || Sbjct 2040 CT--GGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAG 2097 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 119290 ||| |||| || |||| |||| |||||| || || | ||| ||| |||| | Sbjct 2098 CATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCAC- 2156 Query 119291 GACATCG-TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 119349 || || |||| || | ||||||||| || || ||| || || || ||| | Sbjct 2157 GAATGCGATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCT 2216 Query 119350 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 119409 | || || ||||||| || || || ||| |||| | | | | ||||||| | Sbjct 2217 TCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATG 2276 Query 119410 ACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC 119469 || |||||| ||| |||||||| ||||| ||||| || | || || |||| ||| Sbjct 2277 CCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAA-GTAC 2335 Query 119470 CT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 119528 | |||||||| || |||||| || | | | |||||| | |||||||| || Sbjct 2336 TTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTCCA 2395 Query 119529 ATCGAGACCCGCATAAACATGTATTGGGG 119557 | | || ||||| | | || |||||| Sbjct 2396 ACGGCAACACGCATCAGGAGGTGTTGGGG 2424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618407447720400