Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq376 176 5e-39 >seq376 Length=20092 Score = 176 bits (194), Expect = 5e-39 Identities = 374/549 (68%), Gaps = 12/549 (2%) Strand=Plus/Minus Query 53239 CCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298 || ||| || ||| || | ||| ||| |||||||| || || || | || || ||||| Sbjct 2365 CCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATGCTTCCCCCACTCTGTT 2306 Query 53299 CAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGA 53358 ||| |||||||| || |||||| || | ||||||| |||| | |||||||| || Sbjct 2305 CAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGTTGACATGAAGGAGGA 2246 Query 53359 CTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGG 53418 | || || ||||||||||| || || ||| |||||| || |||||| | || Sbjct 2245 CAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGATTTCCAAGACTGCCGG 2186 Query 53419 TGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACG 53476 |||||| ||| || || | ||| | | ||||| | || | || || || Sbjct 2185 TGGTATTGGTCTCAACGTCCATCG--CATTCGTGCCACAGGTTCTTACATTGGCGGTACC 2128 Query 53477 AACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTAC 53536 || ||| || ||||||| || || ||||| ||||| ||||| ||||| || | ||| Sbjct 2127 AATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATAACACTGCTAGATAC 2068 Query 53537 GTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595 || |||||||||| ||||| | ||| | | || ||||| || || ||||| ||||| Sbjct 2067 GTTGACCAGGGTGGAAACAAGCGTCCAGGTG-CATTTGCCATTTATCTGGAGCCTTGGCA 2009 Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGC 53653 | |||| | | ||||| | || || ||| ||| || || | ||||| | | || Sbjct 2008 CTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGAAGTCAGAGC 1949 Query 53654 TGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAA 53712 | ||||| |||| ||| ||||| |||| ||| || || |||||| | ||| ||| Sbjct 1948 T--CGTGATTTGTTCTAC-GCTCTCTGGACTCCTGATCTGTTCATGAAGCGGGTTGAGGC 1892 Query 53713 GGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGG 53772 ||| || ||| ||| | ||||| | |||| ||| ||| | | ||||||||| Sbjct 1891 CAACGGTGACTGGACCCTCTTCTGCCCTAGCGAGGCCCCTGGCTTGGCTGATGTCTACGG 1832 Query 53773 TGAGGAGTT 53781 || ||||| Sbjct 1831 CGACGAGTT 1823 Score = 89.7 bits (98), Expect = 6e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| | ||| ||| |||||||||||| | ||| | | | || ||| || Sbjct 845 TCAAGGCTCTATACAAGACCGTGTGGGAGATTTCCCAGCGCCGGATCCTGGAGATGGCTG 786 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 |||| |||||||| | ||| |||||||||||||| || || ||| || || | || Sbjct 785 CTGACCGTGGTGCCTTCATTGACCAGTCCCAGTCGCTCAATATCCATCTGAAGGAGCCCA 726 Query 55848 CACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| |||| | | || | |||||||| || ||||||| ||| | ||||| || Sbjct 725 CCATGGGCAAGCTTA-CTAGCATGCACTTCGCTGGCTGGAAGATGGGTTTAAAGACCGGC 667 Query 55907 ATGTACTATCTGCGGACC 55924 |||||||| ||||| ||| Sbjct 666 ATGTACTACCTGCGTACC 649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547191443682000