Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq406 176 5e-39 seq792 149 7e-31 seq474 129 7e-25 seq376 105 8e-18 seq1809 98.7 1e-15 >seq406 Length=19123 Score = 176 bits (194), Expect = 5e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475 |||||||||| || || || |||||||| || || ||||| ||||| | |||| || | Sbjct 3702 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 3643 Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535 || | ||| | || ||||||||||||||||| || || || |||||||||||| | | Sbjct 3642 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 3583 Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595 | ||||||||||||||||| ||||||| || || || | ||||| || |||| |||| Sbjct 3582 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 3523 Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| || || ||||||| || ||||| Sbjct 3522 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 3486 Score = 159 bits (176), Expect = 4e-34 Identities = 184/247 (74%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| || || || ||||||||| | Sbjct 3256 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 3197 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || ||||||||||||||||| ||||| ||||||||| Sbjct 3196 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 3137 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || |||||||| || || || |||| || || || | ||||| || Sbjct 3136 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 3077 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 |||| |||||| |||||| || || ||| | || || || |||||| | ||| || Sbjct 3076 ATCCAGAAGGAAAGCACTCTACACCTGGTCCTTCGCCTCCGTGGTGGAAA---CTAATGT 3020 Query 27646 TTTTCCT 27652 ||||||| Sbjct 3019 TTTTCCT 3013 Score = 147 bits (162), Expect = 2e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| ||||| | |||| || | || | ||| | Sbjct 4000 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGATACTATCGACAACGTCAAGACC 3941 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| || || || |||||||||||| | || |||||||||||| Sbjct 3940 AAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTTTGCTGGTAAG 3881 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | ||||| || | ||||| || | |||||||| || ||||| || Sbjct 3880 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTCTCCAC 3821 Query 27610 CTAGTCTTGCGTCTTCGCGGTGGA 27633 || ||| | ||||| || |||||| Sbjct 3820 CTGGTCCTCCGTCTGCGTGGTGGA 3797 Score = 141 bits (156), Expect = 1e-28 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || || ||||| ||| || | Sbjct 3484 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAG--AGCT 3427 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || || || || || ||||| || || ||||||| Sbjct 3426 CCGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACC 3367 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || || ||||| |||||||| ||||||| |||||| || | ||||| | Sbjct 3366 AGCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACA 3307 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||| ||||| || ||||| || || | ||||| || ||||| Sbjct 3306 ACATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGG 3258 >seq792 Length=9982 Score = 149 bits (164), Expect = 7e-31 Identities = 340/504 (67%), Gaps = 11/504 (2%) Strand=Plus/Plus Query 64658 TTACTAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTC 64714 |||| || |||||| ||||||| || ||||||| | ||| | || | |||| | Sbjct 7711 TTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCTACCTTTGCCC 7770 Query 64715 AGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTA 64774 | ||||||| |||||| || ||| || || || || || ||||| || || || | Sbjct 7771 AACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGA 7830 Query 64775 TTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCT 64834 | |||||||| || ||||| ||||||||||| ||||| | || || |||||||| |||| Sbjct 7831 TCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCT 7890 Query 64835 CTCGGGACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAGGA 64892 | || || ||||| || ||| || ||||| | || |||||| |||||||| | Sbjct 7891 CCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTT--GCTGTTCTCTCACCTCAACAA 7948 Query 64893 CAAACC-ATCACATGGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGG 64951 | || | || || | | || || | | |||||| | ||||| |||| Sbjct 7949 CCGCCCTAGCAAGAAGGTGGTTGA-GGACATCATCATTGAGGCTGTTGCCATTGAGAAGG 8007 Query 64952 AATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAAC 65011 | ||| | || | || || || ||| |||| |||||||| | || || |||| | Sbjct 8008 AGTTCCTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCC 8067 Query 65012 AGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGT-TTGGTATTAAGCCCTACTGG 65070 ||||||| ||||| || || || || || | | || | | || | ||| |||| Sbjct 8068 AGTATATTGAATTCGTTGCCGACCGTCTAC-TGGTCGCTCTCGGCAACAAGAAGTACTTC 8126 Query 65071 AATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTT 65130 ||| | | || || || || | |||||| | ||| ||| | || ||||| ||||| Sbjct 8127 AATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGACCAACTTC 8186 Query 65131 TTTGAAAAGAGGGTAGGTGATTAC 65154 ||||| ||| | || ||||||||| Sbjct 8187 TTTGAGAAGCGTGTGGGTGATTAC 8210 >seq474 Length=16299 Score = 129 bits (142), Expect = 7e-25 Identities = 141/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 329 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 270 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| |||||||||||||| || Sbjct 269 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 210 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 209 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 151 Query 27594 GGAAT 27598 || || Sbjct 150 GGTAT 146 >seq376 Length=20092 Score = 105 bits (116), Expect = 8e-18 Identities = 399/616 (65%), Gaps = 19/616 (3%) Strand=Plus/Plus Query 81130 TACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189 ||||| ||||| | ||||||| | | |||| | |||| | | | ||| |||| Sbjct 1802 TACTTTTCGTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCTCG 1861 Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGG 81249 ||||||| | ||| |||||| || | ||| || ||||||||| ||||| Sbjct 1862 CTAGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGA 1921 Query 81250 ATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGC 81307 ||||||| ||| ||||| || || ||| | | || || | || ||||| | Sbjct 1922 GTCCAGAGAGCGTAGAACAAATCACG--AGCTCTGACTTCTTCCTTTCCGTGGTTCTTAC 1979 Query 81308 GCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACC 81367 | | || | || || | || || | ||||| ||||||||||| | ||| | | | Sbjct 1980 GGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATG-CA 2038 Query 81368 CCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 ||| | || | |||||||||| ||||| | ||||| || || || |||| | Sbjct 2039 CCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGC 2098 Query 81424 ATAGGGATGATACCATCTGACTGA-CCGTTCGTACCCACGATACGCGACCCCTTGGCGCG 81482 || || | || |||| || ||| || || ||||| | || || || |||| || Sbjct 2099 ATGGGAACAATTCCATTGGA-TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACG 2157 Query 81483 CACCTTGCTGATTGAA----AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACC 81538 | ||| ||| || ||||| || ||||| | ||| |||||| ||||||| Sbjct 2158 AA---TGC-GATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACG 2213 Query 81539 GGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGC 81598 |||| || || || || ||||| ||||| || | |||||||||| |||||| ||| Sbjct 2214 TCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGG 2273 Query 81599 TTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAAT 81658 || || |||||| | || ||||||||||| || |||| || || |||| | Sbjct 2274 ATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGT 2333 Query 81659 AACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATAC 81718 | | ||||| |||| |||||||| | | ||| || | |||||||| | Sbjct 2334 ACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTCAATGTCATTGCCGTGAATTC 2393 Query 81719 CGATAGCTACACGCAT 81734 | | || |||||||| Sbjct 2394 CAACGGCAACACGCAT 2409 >seq1809 Length=1036 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||||| || || || |||||||| |||||| Sbjct 780 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAG 721 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || || || || || | Sbjct 720 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTTGTGCTC 661 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 660 CGCCTGCGTGGTGG 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570284807320800