Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq421 114 1e-20 >seq421 Length=18474 Score = 114 bits (126), Expect = 1e-20 Identities = 196/279 (70%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 30083 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 30142 |||||||| || || ||||| ||| || |||||||| || ||| ||||||| Sbjct 5948 TGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGGGTTCCACGCCGACAGGATGATG 6007 Query 30143 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACGGCGTTTTGCAGCTGATCCACC 30199 || | ||| ||| | ||| | |||| | |||| | | |||||| || || Sbjct 6008 CGGCGGTCGAACGGGGT-TTCTT--TGAGCTTGCGCACGACCTCGGCCAGCTGGTCGACG 6064 Query 30200 CCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGG 30259 |||| |||| ||| || | | | |||| |||||| || |||||||||| ||||||| Sbjct 6065 CCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTACTCCGCCCCGAAATGCCGCCACTGG 6124 Query 30260 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTG-TCCAA 30318 ||||||||||| || |||||||| ||||| ||| |||| | ||||| | | |||| Sbjct 6125 AACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGC-CAGCCCAACGCGATCCAG 6183 Query 30319 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 || || | | |||||| ||||||||||||| | ||| Sbjct 6184 GAACTCGCGGCTCCCGTTGCCGTCCCAGATCTTGATCCC 6222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406292622650280