Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq406 114 8e-21 >seq406 Length=19123 Score = 114 bits (126), Expect = 8e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| || |||||||| ||||| || ||||| || || || || || ||| | ||||| Sbjct 3048 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 3107 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||| || || || | |||||| ||||| || || | ||||||||||| || Sbjct 3108 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTG 3166 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||||| || || | |||||||| |||||| || |||| || || || || Sbjct 3167 AATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTT 3226 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||| ||||| || || |||||||| Sbjct 3227 TCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| |||||||| ||||||||||||||| || || || || || || Sbjct 3807 AGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGG 3866 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || ||||| ||||| || |||||||| ||||| || || | |||||| Sbjct 3867 CCGTCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCC 3926 Query 34609 TTGTC 34613 ||||| Sbjct 3927 TTGTC 3931 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||| || || ||| ||||| || ||||| || || || || || || Sbjct 3495 AGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGG 3554 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || ||||| ||||| ||||| || |||||||| ||||| || || | |||||| Sbjct 3555 CCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCC 3614 Query 34609 TTGTC 34613 ||||| Sbjct 3615 TTGTC 3619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314715829596470