Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq421 116 3e-21 >seq421 Length=18474 Score = 116 bits (128), Expect = 3e-21 Identities = 335/511 (66%), Gaps = 41/511 (8%) Strand=Plus/Plus Query 6547 CTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAAC 6606 ||||| || | || || | |||||||||||||| ||||||||||||| ||| ||| Sbjct 5719 CTCGACATGATCCAAATAAACATGCGCATCCCCCATCGTATGCACCAGCGTCCCCGGATG 5778 Query 6607 CAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGG 6666 || || | | || || | || | ||| ||||| || || ||||| || ||||| Sbjct 5779 CAGATCCGCCGCGTGGGCCAAGATATGCGTCAGCAGCGCATACGACGCAATATTAAACGG 5838 Query 6667 CACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC-- 6724 ||| || | |||||| || | || || || ||| ||| ||||| || ||| Sbjct 5839 CACGCCGAGCCCCATATCGCAACTCCGCTGGTACAGCAAGCAACTGAGCTCGCCTTTCTT 5898 Query 6725 -------------------------GCGACGTAGAATTG-GCAGAGGGTGTGGCACGGGG 6758 | ||| ||||| || ||| | | |||||||| | Sbjct 5899 GCCCGCGCCCGCGCCCCGCGGGTAAGAGACATAGAACTGCGCAAACA-TATGGCACGGCG 5957 Query 6759 GGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTC-A 6817 ||||||||||| | |||||| |||||||||||| ||| | ||| | | ||| | Sbjct 5958 GGAGCGCCATCTTCGCCAGATCCGCCGGGTTCCACGCCGACAGGATGATGCGGCGGTCGA 6017 Query 6818 TCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTG---CAGCTGGTCCGCTCCCTGTCCC 6874 | ||||| | || || | || |||| || ||||||||| | ||| | ||| Sbjct 6018 ACGGGGTTTC--TTTGAGCTTGCG--CACGACCTCGGCCAGCTGGTCGACGCCCAGGCCC 6073 Query 6875 GAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTA 6933 | || || | || ||| || || ||||||||||| || || | ||||||||||||||| Sbjct 6074 GTGTAATCGGTCTGCGCGTCCACG-TACTCCGCCCCGAAATGCCGCCACTGGAACCCGTA 6132 Query 6934 GACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCC-CCGCTTGTCCAGAAAGTCTC 6992 || ||||||| ||||||||| |||| | | ||| ||| ||||| || || | Sbjct 6133 CACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGCCAGCCCAACGC-GATCCAGGAACTCGC 6191 Query 6993 GAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 | ||||| ||||||||||||| | ||| Sbjct 6192 GGCTCCCGTTGCCGTCCCAGATCTTGATCCC 6222 Score = 116 bits (128), Expect = 3e-21 Identities = 335/511 (66%), Gaps = 41/511 (8%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGG-GGGTTCCC 34380 ||| | ||||||||||||| ||||| || || || ||||| ||| ||| | | Sbjct 6222 GGGATCAAGATCTGGGACGGCAACGGGAGCCGCGAGTTCCTGGATC-GCGTTGGGCTGGC 6164 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 |||| ||||||||| ||||||| || ||||||||||||||| | || || ||||| Sbjct 6163 GCACCGGGCCGAGGGCGACCTGGGCCCCGTGTACGGGTTCCAGTGGCGGCATTTCGGGGC 6104 Query 34441 GGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTG---CAGT 34496 |||||| || || ||| || | || || |||| | ||| | ||||||||| || Sbjct 6103 GGAGTA-CGTGGACGCGCAGACCGATTACACGGGCCTGGGCGTCGACCAGCTGGCCGAGG 6045 Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGAT-GACAGAAGGATCGTGATGTGCGCGTGG 34555 |||| || | || || | ||||| | | ||| | | ||| | ||| |||||| Sbjct 6044 TCGTG--CGCAAGCTCAAA--GAAACCCCGTTCGACCGCCGCATCATCCTGTCGGCGTGG 5989 Query 34556 AACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTA 34614 |||||| |||||| | |||||||||||| |||||||| | | ||| || ||||| Sbjct 5988 AACCCGGCGGATCTGGCGAAGATGGCGCTCCCGCCGTGCCATA-TGTTTGCGCAGTTCTA 5930 Query 34615 CGTCGC---------------------------GAATGGGGAGCTGTCCTGCCAGCTCTA 34647 ||| | ||| || ||||| ||| ||| || Sbjct 5929 TGTCTCTTACCCGCGGGGCGCGGGCGCGGGCAAGAAAGGCGAGCTCAGTTGCTTGCTGTA 5870 Query 34648 TCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCT 34707 || || | || |||||| | || |||||||| || ||||| || || ||||| Sbjct 5869 CCAGCGGAGTTGCGATATGGGGCTCGGCGTGCCGTTTAATATTGCGTCGTATGCGCTGCT 5810 Query 34708 CACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGG 34767 ||| | || | || || | | || || ||| ||| ||||||||||||| |||| Sbjct 5809 GACGCATATCTTGGCCCACGCGGCGGATCTGCATCCGGGGACGCTGGTGCATACGATGGG 5750 Query 34768 GGATGCGCATATCTACCTGAACCACATCGAG 34798 |||||||||| | || || | || ||||| Sbjct 5749 GGATGCGCATGTTTATTTGGATCATGTCGAG 5719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448242284224800