Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq406 176 1e-38 seq474 122 2e-22 >seq406 Length=19123 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || || |||||||||||||| || |||| || || | ||||| Sbjct 3273 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 3332 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || |||||||| || ||||| ||||| || || | || || || || Sbjct 3333 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 3392 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| ||||| ||||| ||||| || ||||| || ||||| ||| Sbjct 3393 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 3452 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||||||||| || || | |||||| Sbjct 3453 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 3484 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||| || || |||||||| || || | || || | |||||| Sbjct 3045 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 3104 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || |||||||| || || || ||||| || |||| || ||||||||| Sbjct 3105 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 3164 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || || || ||||| ||||||||||| |||||||| || ||||| ||| Sbjct 3165 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 3224 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || ||||| || || || | |||||| Sbjct 3225 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||||| || || |||||||| || || | || || | ||||| Sbjct 3501 AGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 3560 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| ||||| || || ||||| | || || |||||||| || | || ||||||||| Sbjct 3561 TCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 3620 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||| || || ||| || |||||||| ||||| Sbjct 3621 TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGA---CTCCACCTCGAGGGTGATA 3677 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||| || ||||| ||||| |||| Sbjct 3678 GTCTTACCAGTGAGGGTCTTGACAA 3702 Score = 123 bits (136), Expect = 6e-23 Identities = 144/193 (75%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||| ||||| ||||| ||||| || || | || || | || ||| Sbjct 3813 AGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3872 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| | || || |||||||| || | || ||||||||| Sbjct 3873 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 3932 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||| || || ||| || ||||| || ||||| Sbjct 3933 TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGA---CTCCACCTCAAGGGTGATG 3989 Query 211080 GTCTTTCCCGTGA 211092 |||||||| |||| Sbjct 3990 GTCTTTCCGGTGA 4002 >seq474 Length=16299 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 151 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 210 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || ||||| || |||| || ||||||||||||||||| || ||||| ||| Sbjct 211 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 270 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 271 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 327 Query 211104 AA 211105 || Sbjct 328 AA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159098682630350