Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq406 152 1e-31 seq1292 122 2e-22 seq474 98.7 2e-15 >seq406 Length=19123 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||| ||| || |||| ||||| |||| | || | ||||||| Sbjct 3045 AGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCT 3104 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||||||| || ||||||||||| || || || ||||| || |||||||| |||||||| Sbjct 3105 TCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 3164 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| ||| ||||| ||||| ||| | || || || | ||||| ||| Sbjct 3165 TGAATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTC 3224 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | |||||| | ||| | ||||| Sbjct 3225 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || ||||||||||||| ||||| || | || ||| | ||||| Sbjct 3273 AGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCC 3332 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || ||||| ||||| || || || || || || ||| Sbjct 3333 TCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCT 3392 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| ||| | || || || | ||||| ||| Sbjct 3393 TGGATCTTTGTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTC 3452 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | ||||| Sbjct 3453 TTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 3484 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||||||||| || || ||||| | ||||| |||| | ||| | || ||| Sbjct 3813 AGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 3872 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | || || ||||| || || ||||| |||||||| Sbjct 3873 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 3932 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| || || | ||||| || | ||||| ||| Sbjct 3933 TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTC 3992 Query 225682 TTGCCCGT 225689 || || || Sbjct 3993 TTTCCGGT 4000 >seq1292 Length=4116 Score = 122 bits (134), Expect = 2e-22 Identities = 192/273 (70%), Gaps = 3/273 (1%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| |||||||||| ||||| ||| | ||||||| ||||||| | || Sbjct 2332 ACATTATACTTAATATTTGCATTATTTTCAGGTTTATTAGGTACAGCATTTTCTGTACTT 2273 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||||| ||||||||| | | || ||| |||| ||| || | ||| ||| | | Sbjct 2272 ATAAGATTAGAATTATCAGGACCTGGTGTTCAA-TATATAGCAG--ATAATCAATTATTT 2216 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| | || || ||||| || | |||||||||||| | |||||||| | | Sbjct 2215 AATAGTATAGTAACAGCTCATGCTATTATGATGATTTTCTTTATGGTTATGCCTGCATTA 2156 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 ||||| ||||| || |||| || | || ||| | |||| | |||||||||||| || Sbjct 2155 ATAGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTTGGAGGTCCTGATATGGCATTC 2096 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||| ||||| |||||| || Sbjct 2095 CCTAGATTAAATAATATTAGTTTCTGATTATTA 2063 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||| || |||||||| | |||||| | | ||||||||| || || || | Sbjct 1652 TTCAGGGTGACCGAAGAATCAGAAAAGATGTTGGAATAAGATAGGATCACCACCACCAGC 1711 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| || |||||||||||||||||| |||||||| Sbjct 1712 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAAC 1753 >seq474 Length=16299 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 151 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 210 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 211 AGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 270 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 271 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192476347291460