Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015-
04-30] 3,590 sequences; 24,273,657 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq421 107 1e-18
>seq421
Length=18474
Score = 107 bits (118), Expect = 1e-18
Identities = 254/378 (67%), Gaps = 8/378 (2%)
Strand=Plus/Plus
Query 27349 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 27408
|||||||| || || ||||| ||| || |||||||| || ||| |||||||
Sbjct 5948 TGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGGGTTCCACGCCGACAGGATGATG 6007
Query 27409 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACGGCGTTTTGCAGCTGATCCACC 27465
|| | ||| ||| | ||| | |||| | |||| | | |||||| || ||
Sbjct 6008 CGGCGGTCGAACGGGGT-TTCTT--TGAGCTTGCGCACGACCTCGGCCAGCTGGTCGACG 6064
Query 27466 CCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGG 27525
|||| |||| ||| || | | |||| |||||| || |||||||||| ||| |||
Sbjct 6065 CCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTACTCCGCCCCGAAATGCCGCCACTGG 6124
Query 27526 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTG-TCCAA 27584
||||||||||| || |||||||| ||||| ||| |||| | ||||| | | ||||
Sbjct 6125 AACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGC-CAGCCCAACGCGATCCAG 6183
Query 27585 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 27644
|| || | | |||||| ||||||||||||| | ||| | |||| ||| ||
Sbjct 6184 GAACTCGCGGCTCCCGTTGCCGTCCCAGATCTTGATCCCGGCCGCGGAAAGCGGGAGCGA 6243
Query 27645 GTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 27704
||| | || || |||||| || || || ||| |||||| ||||| |
Sbjct 6244 CGAGGTGCAGCCGGAGATGAACCAGAGGAGTTCGCCCAGGACGGCGCGGAGGAAGACGCG 6303
Query 27705 CTTGGTCGTGAGGAGGGG 27722
|| || |||||||||||
Sbjct 6304 TTTTGTGGTGAGGAGGGG 6321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369491032905290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |