Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq406 174 4e-38 seq474 120 7e-22 seq1809 96.9 8e-15 >seq406 Length=19123 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct 3481 CAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCCGAC 3422 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || || ||||| || ||||| || ||||||||| Sbjct 3421 ACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCAGCAA 3362 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| || || || ||||| | ||||| | || || ||| || Sbjct 3361 CGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAACATC 3302 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || ||||| Sbjct 3301 CAAAAAGAATCTACCCTTCACCTTGT 3276 Score = 156 bits (172), Expect = 1e-32 Identities = 148/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||||| || ||||| || ||||| || ||||| || ||||| ||| Sbjct 3253 CAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCTGAC 3194 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||||||||||||| || || || || || |||||||| Sbjct 3193 ACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAGCAG 3134 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| |||||||| | || || |||| || ||| || Sbjct 3133 CGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAACATC 3074 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 3073 CAGAAGGAA 3065 Score = 125 bits (138), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATC 177989 || || || ||||| || || || ||||||||||||||||| ||| || || ||| Sbjct 3700 GTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGC---GATACTATC 3644 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| |||||||||||||| || || ||||| || |||||||| || | Sbjct 3643 GACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTG 3584 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||| || || || || || || ||||| | ||||| |||| || ||| |||| || Sbjct 3583 ATCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 3524 Query 178110 GAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || ||| || Sbjct 3523 GAATCCACCCTTCACCTGGTTCTG 3500 Score = 118 bits (130), Expect = 3e-21 Identities = 141/190 (74%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999 |||| ||||| || |||||||| |||||||| ||| || || ||||| ||||||| Sbjct 4002 TCACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGC---GATACTATCGACAACGTCA 3946 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | |||||||||||||| || || ||||| || |||||||| || | ||||| || | Sbjct 3945 AGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTTTGCTG 3886 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119 | || ||||| ||||| || | ||||| |||| || ||| | ||||| || || || | Sbjct 3885 GTAAGCAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTC 3826 Query 178120 TGCATCTTGT 178129 | || || || Sbjct 3825 TCCACCTGGT 3816 >seq474 Length=16299 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 330 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 274 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 273 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCG 214 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 213 CCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 154 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 153 GAAGGTATGAA 143 >seq1809 Length=1036 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || |||||||| || || ||||||||||| || |||||||| Sbjct 780 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAG 721 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | || || ||| |||| || || || || ||||| ||||| Sbjct 720 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTGCACCTTGT 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203675832126460