Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq474 143 2e-29 seq406 120 3e-22 seq1809 109 5e-19 >seq474 Length=16299 Score = 143 bits (158), Expect = 2e-29 Identities = 143/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 149 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 208 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||||| || |||||||||| ||| || ||| ||| | Sbjct 209 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 267 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 268 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 327 Query 41852 AAA 41854 ||| Sbjct 328 AAA 330 >seq406 Length=19123 Score = 120 bits (132), Expect = 3e-22 Identities = 170/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||||| |||||||| ||||| ||||||||| Sbjct 3030 CCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAG 3089 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || ||||| || || ||||| || || ||||| ||||| | ||| Sbjct 3090 AGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGA 3149 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTC---GCTCGAC 41809 | | |||||||||| ||| | |||| ||| || | || | ||||| ||| | Sbjct 3150 ATACCCTCCTTGTCC-TGAATCTTTGTCTTGACATTGTCG--ATTGTGTCAGAGCT---C 3203 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||||| || || || || || || || || || ||||| |||||||| Sbjct 3204 TCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| |||||||| ||||| |||||||| Sbjct 3486 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 3545 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || || ||||| || || || |||| ||||| ||||| | ||| Sbjct 3546 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 3605 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || | | ||| | | | ||| ||||| |||||||| Sbjct 3606 ATACCCTCCTTGTCC-TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCAC 3664 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 ||| | || || || ||||| || || ||||| || Sbjct 3665 CTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 3700 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || |||||| |||||||| ||||||||| Sbjct 3798 CCACCACGCAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAG 3857 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| || || || |||| ||||| ||||| | ||| Sbjct 3858 AGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 3917 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || | | ||| | | | ||| ||||| |||||||| Sbjct 3918 ATACCCTCCTTGTCC-TGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCAC 3976 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 3977 CTCAAGGGTGATGGTCTTTCCGGT 4000 >seq1809 Length=1036 Score = 109 bits (120), Expect = 5e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || ||||| || ||||||||| ||||| ||||| Sbjct 644 CCACCACCACGCAGGCGGAGCACAAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCC 703 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || ||||| | || ||||||||||| |||||||| ||||| ||||| ||||| | | Sbjct 704 GAAAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGG 763 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTT 41780 || | | ||||||||| || |||||| Sbjct 764 GGGATACCCTCCTTGTCTATTTTTTTTT 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462283254108000