Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 125 2e-23 seq6 93.3 9e-14 >seq9 Length=2141799 Score = 125 bits (138), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | ||||||| |||| || ||| ||| ||||||||||| | |||| Sbjct 908551 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTTCTTGGCATGAACTC-CAACT 908608 Query 230469 T-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| |||||||| | | || || ||||| || | | Sbjct 908609 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACA 908668 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | ||| | | ||||| |||| || ||||| ||| || || || |||| Sbjct 908669 AGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGA 908728 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| |||| || |||| ||||||||||| Sbjct 908729 CCAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 908778 >seq6 Length=3136824 Score = 93.3 bits (102), Expect = 9e-14 Identities = 432/671 (64%), Gaps = 30/671 (4%) Strand=Plus/Plus Query 281532 CGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCG 281591 ||||| | |||||| |||||||| | ||| || || | || ||| | | ||| ||| Sbjct 2771599 CGCTTAAGGTTGTCCACGATGTCCTCGGGGTTGTAGTTAGGGATGGATGAACTCCAGCCG 2771658 Query 281592 GTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCT 281651 || || ||||| | ||| || |||| || | || | | || || || ||| Sbjct 2771659 GTGCCGATACCGTCAGCACCGTTAACCAGGATCATGGGAACGACGGGCACGTAGATTTCC 2771718 Query 281652 GGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTATCGACG 281711 || || ||||| ||||||||||| | || | || || |||||| | | | Sbjct 2771719 GGCTCGATTTTTTCACCATCATCCTCGTTGTAAGTAAGTAGAGGATCATCATGAGCATGG 2771778 Query 281712 AAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCT 281771 || || |||| | || ||| ||| ||||||| | ||||| || |||| Sbjct 2771779 AAGACACGTCGAGCGAACGGCGACAGGCGAGTGTAGATATAACGAGCACTGGCACAGTCT 2771838 Query 281772 TTACCACCCTGCAGCCTCGAC--CCAAACTGACCCTCCGGCAACAACCAGTTAATGTTAT 281829 |||||||| || | ||| ||||| | ||| ||| || ||||| | || | Sbjct 2771839 GATCCACCCTGGAGAC--GACTACCAAAGTTACCACTGGGCTCCAGACAGTTTACATTGT 2771896 Query 281830 TGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGT 281889 || ||||||| | ||| |||||| |||||| ||| ||| || || | ||||||| Sbjct 2771897 TGGACCCGACGAAGCTCTGTGCCAGGCCGACGATGGTCTGCTGCAGGGAGATGTCACCGT 2771956 Query 281890 GGTGATAGGCGCTGTGTT--CGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGA 281947 | ||||| ||| || | | | ||| | ||| || | | ||||||| || Sbjct 2771957 GTTGATA--CGCAGTCATACCCGAAACGTGACCCGCTAATTCGACCACCTTCATATCCTT 2772014 Query 281948 TGTCAAGTTGCGTTTGAAAGCGCAA-TATAAT--ACTTTTCGTTGAGAAGGCTTGAAACC 282004 ||| ||||||| |||| ||| ||||| || || |||||| ||||||| || Sbjct 2772015 CTTCAGGTTGCGTCGGAAA---CAAGTATAAAGAACCTTACGTTGACCGGGCTTGAGGCC 2772071 Query 282005 ATCAACGACAGACGGAATGCTGCGTTCCAGGTCATA--CCGCGA----GAACAAAATAAG 282058 ||| ||||| || ||||| || || || ||| |||| | ||| | || || Sbjct 2772072 ATCCACGACCGAAGGAAT----CGATC--GGACATTGTCCGCCATACTGAATAGGATGAG 2772125 Query 282059 TTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTC-AAGTTGGTTTC 282117 ||||||| |||||||||| | || || || | ||| || ||| |||| | Sbjct 2772126 CTCCTTGTTGATGAAGTCGGTGTATGAAATCTTGGACACTGAGTGATCCAAGAAGGTT-C 2772184 Query 282118 CCGGCTCGTAT-GCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAA 282176 |||||| | || | || || |||||||||||| || |||||| ||||| ||||| | Sbjct 2772185 CCGGCTTGAATTGACG-CAACCACTCCTTGCGCTCATCGGCCTTCTTCTTGGAGAAAGCA 2772243 Query 282177 CGATCGATGAG 282187 | || || || Sbjct 2772244 AGCTCAATCAG 2772254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823661165750