Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq9 167 2e-36 seq4 132 5e-26 >seq9 Length=2141799 Score = 167 bits (184), Expect = 2e-36 Identities = 319/464 (69%), Gaps = 22/464 (5%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--CAGAGAGGCCGCCTTCGGCGAGCG 117039 ||||||| || ||||| | ||||||||| | || ||| ||| | ||||||| |||| Sbjct 908267 AGAAGGCTGACTGGGCTATCCGCTGGATC-CAGGATCAG-GAGTCGACCTTCGGTCAGCG 908324 Query 117040 CCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATT 117099 || ||||||||||| || || ||||| ||||||| || || |||||| | || || Sbjct 908325 TCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTT 908384 Query 117100 TTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAG 117159 ||||| ||||| || ||| | |||||||| || || ||| ||||||||| ||||| | Sbjct 908385 CTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCG 908444 Query 117160 GGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC 117219 || |||||||| || |||||||| || |||| ||| ||| | || | Sbjct 908445 TGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCT--------GAAC 908496 Query 117220 GAGCGCGGCGCGCGTCAG-----GGAGATCGTCACC---GACGCGGTCGCCATCGAGCAG 117271 | ||| || | |||| |||| ||| | | || || ||| |||| ||| || Sbjct 908497 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 908556 Query 117272 CGCTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTC 117330 ||||| || || || || || |||| ||| || || | || | | | ||||| Sbjct 908557 GAGTTCCTGACTGACGCTCTTCC-TTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTG 908615 Query 117331 GCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTA 117390 || ||||| ||||||||||||||| | || ||| ||| || | | | |||| ||| Sbjct 908616 CCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTT 908675 Query 117391 CAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||||| | ||||| ||| || ||||||| ||| Sbjct 908676 CAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGG 908719 Score = 150 bits (166), Expect = 2e-31 Identities = 187/253 (74%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 907866 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 907925 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || ||||| ||||||| | ||| |||| || |||||||| |||||| Sbjct 907926 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAATGATGACGAGCGCTTCTTCATCTCT 907985 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | ||| || ||||| || || ||| ||||||||| |||||||| || ||| |||| ||| Sbjct 907986 CGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAACGT 908045 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || || |||||||| | | ||||| || ||||||||||| || ||||| || Sbjct 908046 TTCAGCGGAG-AGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGAT 908104 Query 116872 GGAGAACGTGCAC 116884 |||||| | ||| Sbjct 908105 CGAGAACATCCAC 908117 >seq4 Length=4325181 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 1687151 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 1687092 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 1687091 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 1687033 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 1687032 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 1686973 Query 40878 GG 40879 || Sbjct 1686972 GG 1686971 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| ||||| || ||||| | || || ||| | | Sbjct 1033444 ATGCAGATCTTCGTTAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAAAGCTCG 1033503 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| ||| || | ||||| ||||| || ||| | ||||| Sbjct 1033504 GACACTATCGACAACG-TCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 1033562 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || ||||| ||||| || || | ||||| ||| |||||||| Sbjct 1033563 GCAACGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACAA 1033622 Query 40869 CATCCAGAAGGAG 40881 || ||||||||| Sbjct 1033623 TATTCAGAAGGAG 1033635 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 2418547 GACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 2418488 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || || ||| | Sbjct 2418487 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 2418428 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 2418427 CGCCTGCGTGGTGGTGG 2418411 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| |||||||| | || ||||| | | ||||| | | |||| ||||| Sbjct 1032710 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCGAGCGACACTATCGACAACG-TCAAGAG 1032768 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || |||| || || || ||||| || | |||||||| || || |||| ||| ||||| Sbjct 1032769 CAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATCTTCGCTGGCAA 1032828 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | || |||||| ||||| ||||||||||||||| |||| || || Sbjct 1032829 GCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAACATCCAGAAGGAGTCCACCCTCCA 1032888 Query 40893 TCTAGT 40898 || || Sbjct 1032889 CCTTGT 1032894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || ||||| || || || |||||| | || || || | | ||| | | Sbjct 1032995 TAGTCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCA 1033054 Query 40757 TGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGA 40815 | | |||| | ||| ||||| | |||||||| ||||| ||| | |||||||| || Sbjct 1033055 TCGACAACGTT-AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGT 1033113 Query 40816 CTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAG 40875 | |||| ||| || || ||||| || |||| || || || ||||||||||| ||| Sbjct 1033114 TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAG 1033173 Query 40876 AAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| | || || || | || |||||||| | || || Sbjct 1033174 AAGGAATCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 1033214 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || || || | || || ||| | || Sbjct 1033216 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 1033275 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| ||| |||| || |||||||| || || | |||||| Sbjct 1033276 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 1033335 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | ||| ||||| ||||| || || | ||||| | ||| |||||| Sbjct 1033336 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAAC 1033395 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| | || |||| Sbjct 1033396 ATCCAGAAAGAGTCTACATTGCA 1033418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219038994000