Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 136 8e-27 >seq1 Length=5043372 Score = 136 bits (150), Expect = 8e-27 Identities = 444/679 (65%), Gaps = 17/679 (3%) Strand=Plus/Plus Query 248790 CGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAA 248849 ||| |||| |||| | ||||| | ||| | || || | ||||| || || ||| Sbjct 2374578 CGCTATTGTGTACGACCGCGATTTCAACTACAACTTTTTCGGCTTCAAGACTCTTGAGCG 2374637 Query 248850 ATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCG 248909 || || | || |||||||| ||| | | ||||| ||||||| | |||||||| Sbjct 2374638 GTCATACTTGCTTCGGATTGATGGAAAGGTTGCTGAACGTCCTCAGCACCTTTTGATGCG 2374697 Query 248910 AGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTA-CACCGGAA 248968 || |||| || ||||| ||||||| |||| | ||||||| || ||| || Sbjct 2374698 TGTCTCTGTTGGTATTCATGGTAATGACATTGAGAAGGCTATCGAGACCTATCACTTGA- 2374756 Query 248969 TGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCG-TCAAC 249027 || | | | | || |||||| | ||||| | ||||| || |||||| ||| | Sbjct 2374757 TGTCTCAGAAGTATTTCACCCATGCCTCGCCGACTTTGTTCAATGCTGGTACCCCTCAGC 2374816 Query 249028 AATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTAT 249087 |||||| || ||||||||| | | ||| | || || |||| || |||||| Sbjct 2374817 C-TCAGCTTGCTTCATGCTTTCTTGTCGATATGAAGGAGGATAGCATCGAAGGTATTTAT 2374875 Query 249088 GACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGT 249146 |||||||| || | | | || ||| || || ||| || |||||||||||| || Sbjct 2374876 GACACGCTCAAG-ACATGTGCATTGATCTCGAAGACCGCTGGTGGAATCGGTCTCAATGT 2374934 Query 249147 CTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTAT 249206 | |||||| || | || || ||||| ||||| || || | ||||||| Sbjct 2374935 GCACCGCATCCGTGCTACCGGCTCCTACATTGGTGGTACCAACGGTTCCTCCAATGGTAT 2374994 Query 249207 CGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------ 249260 || ||| | || || || | ||| ||||| | | |||||| || Sbjct 2374995 TGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATATGTAGACCAGGGAGGAAACAA 2375054 Query 249261 GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTT 249320 ||| | | || | || ||||| || ||||| |||||||||||| | || ||||| Sbjct 2375055 GCGTCCA---GGTGCTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTCTTCGAGTT 2375111 Query 249321 CCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGG 249380 ||| || | |||||| |||| || ||| ||||||| || || |||||||| | Sbjct 2375112 CCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAGCCCGCGATCTCTTCTATGC 2375171 Query 249381 CCTGTGGGTCTCC-GACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTC 249439 ||| | || |||| |||||||||||| || || | ||| ||||||| ||||| || Sbjct 2375172 CCTCT-GGACTCCGGACTTGTTCATGAAGCGAGTTGAAGCCAACGGCGACTGGACTCTCT 2375230 Query 249440 TTTCTCCGTCCGACGCCCC 249458 | | ||| ||| ||||| Sbjct 2375231 TCTGTCCTAACGAGGCCCC 2375249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766056059200