Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28]
25 sequences; 38,507,590 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 7e-17
>seq4
Length=4325181
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| || || ||||||| | | |||||| ||||| |||||||| || ||
Sbjct 1033599 ATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 1033540
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || |||| ||||||| | ||| |||||| | | || || || | |||||
Sbjct 1033539 GTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGAT 1033480
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || || || |||||||||||
Sbjct 1033479 AGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 1033444
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||||||||| ||||| || || || | ||| |||||| || |||| | ||| ||
Sbjct 1033424 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCG 1033365
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | || || | | ||||| || |||||||| || ||||| || | |
Sbjct 1033364 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGA 1033305
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| |||| ||| || ||| ||||| | || || || | ||| || || |||
Sbjct 1033304 ATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTT 1033245
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || || ||||||||
Sbjct 1033244 CCGGTGAGAGTCTTGACGAAAATCTGCAT 1033216
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||| |||| |||||||| | |||||||||||| || | ||| || || |
Sbjct 1033214 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 1033155
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| ||||| ||||| || || | ||||| || | ||||| || || |||
Sbjct 1033154 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 1033095
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGAC 94959
|| ||||||||||| | ||||| ||| ||| | ||| || || || || || ||
Sbjct 1033094 ATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATC-GCTTGACTCAAC 1033036
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995
|||| ||||| || |||||||| || || |||||
Sbjct 1033035 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 1033000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291059909000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |