Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq9 136 8e-27 seq2 114 3e-20 seq6 109 1e-18 >seq9 Length=2141799 Score = 136 bits (150), Expect = 8e-27 Identities = 273/401 (68%), Gaps = 4/401 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||| || ||||| ||| Sbjct 908741 TCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTG 908682 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | |||| | |||||| || || | || ||||| || || ||||| | Sbjct 908681 GCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATG 908622 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| | ||||||||||||| | | ||||||| || ||| | | Sbjct 908621 TACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGG 908562 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGAC-A 251800 || ||||| || ||| || || ||| | | || ||| ||| | || || | | Sbjct 908561 AACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTCCTCCACAATCTG--AGGGTCGG 908504 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | ||| | ||| | ||| | || || |||| | ||| |||||||| || | Sbjct 908503 GGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCAC 908444 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||| | ||||||||| | || || ||||||| ||||| ||| | ||||||| Sbjct 908443 GAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGA 908384 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||| | | |||||||| ||||| | | |||||| ||| Sbjct 908383 AGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAACA 908343 >seq2 Length=4705242 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| |||| ||| Sbjct 3394953 GGTGAGGATCTGTGCAACTGCACGTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 3394894 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | |||||||| | || || |||||| |||||||||| || | Sbjct 3394893 CAGACCCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTACT 3394834 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || |||| ||||| || || || || || Sbjct 3394833 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 3394774 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 3394773 GATGAGGTCAAGACTGTCTACGTTGAGCACGACTTGGATTC 3394733 >seq6 Length=3136824 Score = 109 bits (120), Expect = 1e-18 Identities = 411/636 (65%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||||||| ||| ||| | ||| |||| |||| | ||||| || || | Sbjct 2772221 GATGAGCGCAAGGAGTGGTTGCGTCAATTCAAGCCGGGAACCTTCTTGGATCACTCAGTG 2772162 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| || | | | ||||||||| ||||||||||||| || ||| | |||| | Sbjct 2772161 TCCAAGATTTCATACACCGACTTCATCAACAAGGAGCTCATCCTATTCAGTATGGCGG-A 2772103 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 |||| || || ||||| || ||||||||||||||||| || |||||| | Sbjct 2772102 CAATGT---CCGATCGATTCCTTCGGTCGTGGATGGCCTCAAGCCCGGTCAACGTAAGGT 2772046 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || | | | ||| || |||||| | || || ||||| | | || | || Sbjct 2772045 TCTTTATACTTGTTTCCGACGCAACCTGAAGAAGGATATGAAGGTGGTCGAATTAGCGGG 2771986 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | | || || | || ||| || || |||||||| |||||| |||| || Sbjct 2771985 TCACGTTTCGGGTATGACTGCGTATCAACACGGTGACATCTCCCTGCAGCAGACCATCGT 2771926 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 ||| |||||||| || || || ||||| | |||| ||| |||| ||| | Sbjct 2771925 CGGCCTGGCACAGAGCTTCGTCGGGTCCAACAATGTAAACTGTCTGGAGCCCAGTGGTAA 2771866 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| |||||| ||||||| || |||| ||| | ||||||| || Sbjct 2771865 CTTTGGTAGTCGTCTCCAGGGTGGATCAGACTGTGCCAGTGCTCGTTATATCTACACTCG 2771806 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTA 218912 ||||| |||| ||| | | ||| || || || |||||| | ||| |||| || Sbjct 2771805 CCTGTCG-CCGT-TCGCTCGACGTG-TCTTCCATGCTCATGATGATCCTCTACTTACTTA 2771749 Query 218913 TCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||||| |||||| || ||||| || || ||||| | |||| | | Sbjct 2771748 CAACGAGGATGATGGTGAAAAAATCGAGCCGGAAATCTACGTGCCCGTCGTTCCCATGAT 2771689 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 || || || ||||| | |||||||| || || | ||| | ||| ||| ||||| Sbjct 2771688 CCTGGTTAACGGTGCTGACGGTATCGGCACCGGCTGGAGTTCATCCATCCCTAACTACAA 2771629 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| |||||||| | |||||| | ||||| ||||| Sbjct 2771628 CCCCGAGGACATCGTGGACAACCTTAAGCGACTCAT 2771593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836470771025