Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28]
25 sequences; 38,507,590 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq4 82.4 7e-11
>seq4
Length=4325181
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || ||||| | | || || || || || || ||||| ||||| ||||| ||
Sbjct 1032915 ATTCCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCA 1032856
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| ||| || | || || || ||| | |||| || |||||||| ||
Sbjct 1032855 GAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGA 1032796
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| ||||| ||||| || |||| || | || | |||||| |||||
Sbjct 1032795 GGAATGCCTTCCTTATCCTGAATCTTGCTCTTGA-CGTTGTCGATAGTGTCGCTCGACTC 1032737
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316
||| || | ||| | || ||||||||
Sbjct 1032736 GACCTCCAAAGTGATGGTCTTGCCGGT 1032710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003058749000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |