Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq9 143 3e-29 seq1 113 6e-20 >seq9 Length=2141799 Score = 143 bits (158), Expect = 3e-29 Identities = 311/460 (68%), Gaps = 19/460 (4%) Strand=Plus/Minus Query 127221 CCAGCTTGCCG-TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279 ||||||| | | || || ||||| ||||||||||||||||| ||||| || | ||| | Sbjct 908771 CCAGCTTTCTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAG 908712 Query 127280 ATATTCTCCATAAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAA 127334 || || ||||| || ||||||||||| | |||| | | |||||| |||| Sbjct 908711 ATGTTGTCCATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAA 908657 Query 127335 TCTGTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCA 127394 |||||||| || | |||| |||||||||||| ||||| | ||||||| Sbjct 908656 GAGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCA 908597 Query 127395 TACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTT 127454 | || | || || || || ||||| | |||| ||||||||||| ||||||| Sbjct 908596 TGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTT 908537 Query 127455 CCCGTACGATGGCGTGA---ATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAG 127510 || ||||| ||| | | | | | || | ||| | | || | |||| Sbjct 908536 CC---ACGATAACGTCCTCCACAATCTGAGGGTCGGGGCGGTTGT-TCAGGTGCGAGAAG 908481 Query 127511 AGTTCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAG 127570 || |||||| || |||||||||||| ||||| ||||| || || || ||||| Sbjct 908480 AGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAT 908421 Query 127571 CACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAG 127630 ||||| ||||| | || |||||||||| |||||| || | || || || ||| Sbjct 908420 GTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAG 908361 Query 127631 AAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCT 127670 |||||||| ||||| ||| ||||| || | ||||||| Sbjct 908360 AAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCT 908321 >seq1 Length=5043372 Score = 113 bits (124), Expect = 6e-20 Identities = 575/907 (63%), Gaps = 26/907 (3%) Strand=Plus/Minus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||| ||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 2376297 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 2376238 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 115835 || |||||||| || | | |||| | | |||||| | | ||||| ||||||| Sbjct 2376237 GACGGAGCCACC---CTCGGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 2376181 Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 115892 | | |||| ||| || | ||||| || ||||||||||| ||| Sbjct 2376180 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 2376124 Query 115893 GCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 115952 || | |||||||| | ||||| ||||| |||||||| ||| |||||||| || Sbjct 2376123 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 2376064 Query 115953 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCT 116012 ||| || || |||||||| |||| || | ||||||||| | ||| | Sbjct 2376063 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 2376004 Query 116013 AATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TCCCACATAT 116071 || | ||||| ||||||||||| || || | || || |||||||| | Sbjct 2376003 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 2375945 Query 116072 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 116131 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 2375944 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 2375885 Query 116132 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 116191 ||| |||| || || || | ||| |||| || || ||||| || || | | Sbjct 2375884 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 2375825 Query 116192 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCG 116251 || | ||| |||||| || || || | | ||| || || |||| | Sbjct 2375824 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 2375765 Query 116252 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 116311 | ||||| | |||||| || |||| ||||| || | ||| || | ||| | | || Sbjct 2375764 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTT-GCTGTTCTTG--GCCT 2375708 Query 116312 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 116368 | || || || |||| ||||||| | | | || || || | |||| Sbjct 2375707 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 2375648 Query 116369 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 116425 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 2375647 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 2375591 Query 116426 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 2375590 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 2375531 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| ||||| | || || || || || |||| |||||| || || |||| ||| Sbjct 2375530 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 2375471 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| ||||||||||| ||||| | || | || ||||| || || | || ||||||| Sbjct 2375470 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 2375411 Query 116606 CCTTCCA 116612 | | ||| Sbjct 2375410 CATACCA 2375404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507008279000