Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq9 131 2e-25 seq4 123 2e-23 >seq9 Length=2141799 Score = 131 bits (144), Expect = 2e-25 Identities = 175/243 (72%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 133200 GTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCAC 133259 ||| | |||||| || || || || ||||| ||||| || ||||| | |||||| Sbjct 908117 GTGGATGTTCTCGATCATAATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGATCTGCAC 908058 Query 133260 TTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAA 133319 ||| |||||| |||| ||| ||||||||||| ||||||||| ||| || || || Sbjct 908057 CTCTCCGCTGAAACGTTCGAGCAGGTTTTCGTTGACAATGCCGTCGGAGGCAGCAAAGAA 907998 Query 133320 GGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCG 133376 ||| || ||| | |||||| |||||||| || |||| ||| | ||||||| | Sbjct 907997 GGCAAGTACGCGAGAGATGAAGAAGCGCTCGTCATCATTCAGGCGGTTGTGCCAGTCGTG 907938 Query 133377 CGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 ||||| || || || | |||||| ||||||| || || |||||||| || ||||| Sbjct 907937 AAGATCCTTAGAAAGATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTA 907878 Query 133437 CAT 133439 ||| Sbjct 907877 CAT 907875 Score = 116 bits (128), Expect = 4e-21 Identities = 341/516 (66%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| ||| ||| || || || || || ||||| || || || || || || | Sbjct 908778 CATCACACCAGCTTTCTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGC 908719 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || ||| ||| ||| || || || ||||||| | ||| ||| |||| || | Sbjct 908718 CAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC 908659 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 || |||| || || | |||||| |||||||| ||||| || |||| | | | || Sbjct 908658 AAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTT 908599 Query 132771 AAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | || || ||| |||| || || || || || || || | ||| |||| ||| | Sbjct 908598 CATGCCAAGAAGAGCGCAA-GGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAG 908540 Query 132830 CGTC---GGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || | | ||| ||| || | | || ||| |||| | | ||| || Sbjct 908539 CTTCCACGATAACGTCCTCCACAATCTGAGGGTCGG--GGCGGTTGTTC-AGGTGCGAGA 908483 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | || |||||||||||| || | ||||| || | || || || |||||| || Sbjct 908482 AGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGA 908423 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | || | |||||||| | ||| || || || ||||| || || | |||||| || | Sbjct 908422 ATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGG 908363 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCT 133065 | ||||||| ||||| || || ||||| ||||| || |||| ||||| || | || || Sbjct 908362 AGAAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGGTCGACTCCT 908303 Query 133066 -TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| ||||||||| | ||||| || ||||| Sbjct 908302 GATCCTG--GATCCAGCGGATAGCCCAGTCAGCCTT 908269 >seq4 Length=4325181 Score = 123 bits (136), Expect = 2e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 1687151 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 1687092 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 1687091 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 1687033 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| || Sbjct 1687032 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 1686973 Query 38432 GG 38433 || Sbjct 1686972 GG 1686971 Score = 113 bits (124), Expect = 5e-20 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||| || || || |||||| | || || ||| | | ||| | | Sbjct 1032995 TAGTCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCA 1033054 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | | || |||| ||| |||||||| || |||||| ||||||| ||||| Sbjct 1033055 TCGACAACGTTAAGAGCAAAA-TCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGT 1033113 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 | || | ||| || || ||||| || |||| || || || ||||||||||| || Sbjct 1033114 TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAG 1033173 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| | || || || ||||| ||||| ||| | || || Sbjct 1033174 AAGGAATCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 1033214 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || || || | || || || | || Sbjct 1033216 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 1033275 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || ||| || | || |||||||||||||| | ||||| Sbjct 1033276 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 1033335 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| ||||| ||||| || || | ||||| | ||| |||||| Sbjct 1033336 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAAC 1033395 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || |||| ||||| || ||| Sbjct 1033396 ATCCAGAAAGAGTCTACATTGCACTTGGTCCTCCGT 1033431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172643696000