Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 seq4 100 3e-16 seq9 87.8 2e-12 >seq1 Length=5043372 Score = 125 bits (138), Expect = 8e-24 Identities = 285/419 (68%), Gaps = 25/419 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | ||||| | || |||| |||| | ||||||| | Sbjct 3386506 CGATCGAAACGTCCAGGCCGCATCAGAGCCTTGTCCAGAACATCGGGTCTGTTTGTACCA 3386447 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | | |||| ||| |||||| |||||||| || |||| |||| Sbjct 3386446 GCCAAGACAACCA---CTTGCTCAGAGGTGTTGAAACCATCCATTTCAGTAAGAATCTGG 3386390 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT--GCCGAAC---GCT-TC 11673 || | ||| ||||||||||| || |||||| || | ||| || Sbjct 3386389 TTCAGCGTGCTCTCACGCTCATCATTTCC------ACCACCAAAGCTTTGCTTTGCTCTC 3386336 Query 11674 ---TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||||| | || || |||||||| ||||| | ||| || || ||| ||| || Sbjct 3386335 GATTTACCTATGGCATCGATCTCATCAATGAAGATGATGCAAGGCGTGTTCTTACGAGCA 3386276 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | | || || ||||| ||||| | ||||||||| ||||||||||||||||| | | Sbjct 3386275 TTGGCAAAGAGATCACGGACACGGGAAGGTCCAACACCAACGAACATCTCAACGAACTCT 3386216 Query 11791 GCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAG-CGATGGCTCGAGCGAGGA 11848 | || || || || || |||||| ||| ||||| | || || || | || || | Sbjct 3386215 GAACCACTGACGCT-AAAAAACGGAACACCAGATTCACCGGCCGTTGCCTTG-GCAAGCA 3386158 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 | |||||||| ||||| || | ||||| |||| ||| || || || ||||| |||||| Sbjct 3386157 GTGTCTTACCAGTACCGGGAGGACCAGAAAGAATGGCACCGCGAGGAATCTTAGCACCA 3386099 Score = 114 bits (126), Expect = 2e-20 Identities = 428/665 (64%), Gaps = 7/665 (1%) Strand=Plus/Minus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGG 110590 |||||||||| | || || ||||| | | || |||| || ||||||||||| | Sbjct 2375284 CCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAG 2375225 Query 110591 ACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGA 110650 ||| | || | ||||| | ||||||||||| ||| ||| |||| | || ||| Sbjct 2375224 TCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGA 2375165 Query 110651 AAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCA 110710 | || || ||| | | || || | ||| ||||| ||| || || | || || | Sbjct 2375164 AGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGA 2375105 Query 110711 TGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA---CCCG 110767 || ||| | |||||| || || | || | || | | || ||| || Sbjct 2375104 AGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTC 2375045 Query 110768 CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGG 110827 |||||| ||||| | || ||| ||||| |||| |||||| |||| ||| |||| || Sbjct 2375044 CCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGG 2374985 Query 110828 ATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATAC 110887 | ||| || ||||| | ||| ||| | ||||| ||| ||| | || | || Sbjct 2374984 AGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTGAGAC 2374925 Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCA 110946 | || ||||| || ||| || |||||| ||| |||| || |||||||||| Sbjct 2374924 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCT-TGAGCGTGTCATAAATACCT 2374866 Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTT 111006 || || ||| |||| | | | |||||||| |||| | |||||| |||| || Sbjct 2374865 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 2374806 Query 111007 CCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTA 111065 || |||||||| | || || | ||||| |||| | || | || |||||| || || Sbjct 2374805 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAA-ATACTTCTGAGACATCAAGTGATA 2374747 Query 111066 TGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACAT 111125 || |||| || | || ||||| |||||||||| | || ||||| || | Sbjct 2374746 GGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 2374687 Query 111126 ATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGT 111185 | ||||| ||| | ||||||||||| || | | ||| | ||| || || Sbjct 2374686 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAGT 2374627 Query 111186 CTTGA 111190 ||||| Sbjct 2374626 CTTGA 2374622 >seq4 Length=4325181 Score = 100 bits (110), Expect = 3e-16 Identities = 267/408 (65%), Gaps = 9/408 (2%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| ||||| | ||| |||||||||||||| | ||||||| | ||| ||| Sbjct 1370814 GAATCCGTCAAGTTCCGTGAGAAGCTGGTTCAGTGTCTGTTTAA---CAT------AGGC 1370764 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711 | | | | | | | |||| ||| | || || | |||||| ||||| | |||| Sbjct 1370763 CGCATCCCTTTCGTTCCTCTTCGCACCTATGGCATCCAGCTCATCAATGAAGATGATAGC 1370704 Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771 ||| ||| ||||| || ||| |||||||| |||||||| || || ||||| || Sbjct 1370703 AGGTGCCTTGCTTCGTGCTTGAGTGAACAGTTCACGGACACGCTTGGCACCTACACCAAC 1370644 Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831 | ||| || |||| | | |||| | | ||| || ||| || ||| || || Sbjct 1370643 GTACACTTCGTCGAACTCAGAACCAGACATGTAGAAGAAAGGCACACCAGCCTCTCCTGC 1370584 Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACG 11891 | ||| || || || || ||||| || |||||||| | ||| | ||||| |||| Sbjct 1370583 TACGGCACGGGCCAGCAGCGTCTTTCCGGTACCAGGAGGGCCAACAAGAAGCACGCCCTT 1370524 Query 11892 GGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTC 11951 || | |||| ||||| | | || || || ||| ||||| || || | ||| Sbjct 1370523 CGGCAACTTGCCACCAAGAGAGGAAAATCGTTCTGGGTTCAGCAGGAATTCAACCAGCTC 1370464 Query 11952 CTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 || |||||| ||||| || |||| || | ||||||||||| || Sbjct 1370463 CTGAAGTTCTTCCTTAGCTTCGTCGCAGCCATGCACATCGGTGAATCG 1370416 >seq9 Length=2141799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 818265 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 818206 Query 136777 GGGAACAGCTTTT 136789 |||| || |||| Sbjct 818205 GGGATCATTTTTT 818193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975815945000