Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-34 >seq1 Length=5043372 Score = 161 bits (178), Expect = 1e-34 Identities = 608/940 (65%), Gaps = 28/940 (3%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 2375282 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 2375223 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | | | |||||| ||||| || | || ||| |||| || || ||| || Sbjct 2375222 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 2375164 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | || ||| ||| || || || || || |||||||| ||||| | Sbjct 2375163 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 2375104 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| | ||||| || || | || || || | | || || || || |||||||| Sbjct 2375103 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 2375044 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 2375043 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 2374984 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||| || || ||| ||| || || | || || || | | || | ||| Sbjct 2374983 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 2374926 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | ||||| || | |||||||| ||||| Sbjct 2374925 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 2374866 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | |||||| || || | ||| | || || Sbjct 2374865 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 2374806 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 2374805 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 2374746 Query 70054 GTTTCAATAGCTGATTCTATATCCCACT--GATGAATTCCTATCGCGACACGCATCAACA 70111 || || ||||| |||| || || | |||||| || | | |||||||||||| | Sbjct 2374745 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 2374688 Query 70112 TATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 |||||||| |||| | ||| || || | || | || |||||| || | Sbjct 2374687 GGTGCTGAGGACGTTCAGCAACCTTTCCATCA---ATCCGAAGCAAGTATGACCGCTCAA 2374631 Query 70169 GAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 |||| || || || ||| ||||||| ||||| || | ||||| | |||| | || || Sbjct 2374630 GAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTT 2374573 Query 70227 TAGTTTATCCTTATATTTGGTAACTATATC---CATAACAGTAGGTGAGATAATCGGAGA 70283 |||| || || ||| | ||||| || | | | | ||| || || || | Sbjct 2374572 GAGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTT---TGATATCATTGGGGC 2374516 Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343 |||| ||| || || || | || | | ||| ||| || || ||| | Sbjct 2374515 AGGTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTG 2374456 Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 || ||||||| |||||| | || || | ||||| | || || ||||| || ||||| Sbjct 2374455 CTTCTTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTC 2374396 Query 70404 AGGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 |||||| ||||| || ||| || || | || ||||| Sbjct 2374395 TGGATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 2374357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908585341000