Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq9 154 2e-32 seq1 116 5e-21 >seq9 Length=2141799 Score = 154 bits (170), Expect = 2e-32 Identities = 311/459 (68%), Gaps = 22/459 (5%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 908759 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 908700 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || ||||||||||| | |||| | | ||| || |||| |||| Sbjct 908699 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAAGAGCGACCAGGA 908645 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||||||||||| ||||| | ||||||||| || | || Sbjct 908644 GACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAG 908585 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || ||||| | |||| ||||||||||| ||||||||| ||||| Sbjct 908584 CGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCC---ACGATAA 908528 Query 129963 CGTGA---ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 ||| | ||| | | | || | ||| || | |||||| || | | Sbjct 908527 CGTCCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAG---CAGGCAAG 908471 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| || |||||||||||| ||||| ||||| || || || ||||| ||||| | Sbjct 908470 CAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGG 908411 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | || |||||||||| |||||| || | || || || ||||||||||| | Sbjct 908410 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATAC 908351 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||| ||| ||||| || | |||||||| | | |||| Sbjct 908350 CCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 908312 >seq1 Length=5043372 Score = 116 bits (128), Expect = 5e-21 Identities = 576/909 (63%), Gaps = 26/909 (3%) Strand=Plus/Minus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| |||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 2376297 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 2376238 Query 118058 GATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 118114 || ||| |||||| | | | |||| | | |||||| | | ||||| ||||||| Sbjct 2376237 GACGGAGCCACCCTC---GGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 2376181 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 118171 | | |||| |||| || | ||||| || ||||||||||| ||| Sbjct 2376180 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 2376124 Query 118172 GCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 118231 || | ||||| || | ||||| ||||| |||||||| ||| |||||||| || Sbjct 2376123 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 2376064 Query 118232 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCT 118291 ||| || || |||||||| |||| || | |||||| || | ||| | | Sbjct 2376063 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 2376004 Query 118292 AATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATAT 118350 || | ||||||||||||||||| || || | || || | |||||| | Sbjct 2376003 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 2375945 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 2375944 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 2375885 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 ||| |||| || || || | ||| |||| || || || || || || | | Sbjct 2375884 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 2375825 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 || | ||| |||||| || || || | | || || || |||| | Sbjct 2375824 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 2375765 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | ||||| | |||||| || |||| ||||| || | ||| || ||| || || Sbjct 2375764 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGC---CT 2375708 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || || || |||| ||||||| | | | || || || | |||| Sbjct 2375707 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 2375648 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 118704 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 2375647 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 2375591 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 2375590 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 2375531 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 |||| || || | ||| || || || || |||| |||||| || || |||| ||| Sbjct 2375530 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 2375471 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| ||||||||||| |||||| | || | || ||||| || || | || ||||||| Sbjct 2375470 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 2375411 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 2375410 CATACCAGA 2375402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435006739000