Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 165 9e-36 seq6 95.1 1e-14 >seq1 Length=5043372 Score = 165 bits (182), Expect = 9e-36 Identities = 355/524 (68%), Gaps = 10/524 (2%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACT---ACACGCGT 53236 |||||| | ||||| ||||| ||| | | ||||| || ||| | ||| | | | | Sbjct 2374678 CCTCAGCACCTTTTGATGCGTGTCTCTGTTGGTATTCATGGTAATGACATTGAGAAGGCT 2374737 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 || ||||| || |||| ||| || ||||| || || || ||| |||| || || Sbjct 2374738 ATC---GAGACCTATCACTTGATGTCTCAGAAGTATTTCACCCATGCCTCGCCGACTTTG 2374794 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 ||||| |||||||| ||| |||||| | | ||||| || || | |||||||| Sbjct 2374795 TTCAATGCTGGTACCCCTCAGCCTCAGCTTGCTTCATGCTTTCTTGTCGATATGAAGGAG 2374854 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 || ||||| || || || || ||||||||| ||||| ||||| ||| | Sbjct 2374855 GATAGCATCGAAGGTATTTATGACACGCTCAAGACATGTGCATTGATCTCGAAGACCGCT 2374914 Query 53417 GGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475 ||||| |||||| || | ||| | | ||||||| | |||| | || || || Sbjct 2374915 GGTGGAATCGGTCTCAATGTGCACCG-CATCCGTGCTACCGGCTCCTACATTGGTGGTAC 2374973 Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 ||||| | || |||| || || || |||||||| || ||||||||||| ||| | || Sbjct 2374974 CAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATA 2375033 Query 53536 CGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 || ||||||| || ||||| | ||| | | || ||||| ||| | ||||| |||| Sbjct 2375034 TGTAGACCAGGGAGGAAACAAGCGTCCAGGTG-CTTTTGCCATTTACTTGGAGCCTTGGC 2375092 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 ||||||| | | ||||| ||||| || || ||| || ||| | || || || | Sbjct 2375093 ACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAG 2375152 Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||| || || || || || |||| ||||||| | |||||| Sbjct 2375153 CCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATG 2375196 >seq6 Length=3136824 Score = 95.1 bits (104), Expect = 1e-14 Identities = 210/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 152761 TGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATG 152820 || || | ||| | || ||| ||||||||||| || || ||| ||||| ||||||||| Sbjct 2772541 TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCATG 2772600 Query 152821 ATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGA-CCTTTC-CATGTTGAA 152878 ||||||||| | || || ||||| |||| | | |||| | ||||| || || | Sbjct 2772601 ATCATCAGATGTCCATAACGCAGCCCACG--GGTATCCGTGTATTCTTTCTTGTGCTGCA 2772658 Query 152879 GCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGG 152938 ||| |||| ||||||| ||| | ||| | || | | | ||||| | |||| Sbjct 2772659 ACCCAAGGAAGTTTTTGATGTTCTGGATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTGG 2772718 Query 152939 CATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG-CCT 152997 |||| || || || || ||||||| ||||| || || || || || | | | ||| || Sbjct 2772719 CATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACC-AAAGAGATCCGGACCG 2772777 Query 152998 A-CAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAG 153056 | || ||| | | || || || || || | || || |||||||| || || | ||| || Sbjct 2772778 ACCACCGCAC-GTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAG 2772836 Query 153057 CGTACA 153062 || || Sbjct 2772837 TGTGCA 2772842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215828995000