Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28]
25 sequences; 38,507,590 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 9e-36
seq6 95.1 1e-14
>seq1
Length=5043372
Score = 165 bits (182), Expect = 9e-36
Identities = 355/524 (68%), Gaps = 10/524 (2%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACT---ACACGCGT 53236
|||||| | ||||| ||||| ||| | | ||||| || ||| | ||| | | | |
Sbjct 2374678 CCTCAGCACCTTTTGATGCGTGTCTCTGTTGGTATTCATGGTAATGACATTGAGAAGGCT 2374737
Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296
|| ||||| || |||| ||| || ||||| || || || ||| |||| || ||
Sbjct 2374738 ATC---GAGACCTATCACTTGATGTCTCAGAAGTATTTCACCCATGCCTCGCCGACTTTG 2374794
Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356
||||| |||||||| ||| |||||| | | ||||| || || | ||||||||
Sbjct 2374795 TTCAATGCTGGTACCCCTCAGCCTCAGCTTGCTTCATGCTTTCTTGTCGATATGAAGGAG 2374854
Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416
|| ||||| || || || || ||||||||| ||||| ||||| ||| |
Sbjct 2374855 GATAGCATCGAAGGTATTTATGACACGCTCAAGACATGTGCATTGATCTCGAAGACCGCT 2374914
Query 53417 GGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475
||||| |||||| || | ||| | | ||||||| | |||| | || || ||
Sbjct 2374915 GGTGGAATCGGTCTCAATGTGCACCG-CATCCGTGCTACCGGCTCCTACATTGGTGGTAC 2374973
Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535
||||| | || |||| || || || |||||||| || ||||||||||| ||| | ||
Sbjct 2374974 CAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATA 2375033
Query 53536 CGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594
|| ||||||| || ||||| | ||| | | || ||||| ||| | ||||| ||||
Sbjct 2375034 TGTAGACCAGGGAGGAAACAAGCGTCCAGGTG-CTTTTGCCATTTACTTGGAGCCTTGGC 2375092
Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654
||||||| | | ||||| ||||| || || ||| || ||| | || || || |
Sbjct 2375093 ACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAG 2375152
Query 53655 GCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
||| || || || || || |||| ||||||| | ||||||
Sbjct 2375153 CCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATG 2375196
>seq6
Length=3136824
Score = 95.1 bits (104), Expect = 1e-14
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 152761 TGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATG 152820
|| || | ||| | || ||| ||||||||||| || || ||| ||||| |||||||||
Sbjct 2772541 TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCATG 2772600
Query 152821 ATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGA-CCTTTC-CATGTTGAA 152878
||||||||| | || || ||||| |||| | | |||| | ||||| || || |
Sbjct 2772601 ATCATCAGATGTCCATAACGCAGCCCACG--GGTATCCGTGTATTCTTTCTTGTGCTGCA 2772658
Query 152879 GCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGG 152938
||| |||| ||||||| ||| | ||| | || | | | ||||| | ||||
Sbjct 2772659 ACCCAAGGAAGTTTTTGATGTTCTGGATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTGG 2772718
Query 152939 CATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG-CCT 152997
|||| || || || || ||||||| ||||| || || || || || | | | ||| ||
Sbjct 2772719 CATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACC-AAAGAGATCCGGACCG 2772777
Query 152998 A-CAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAG 153056
| || ||| | | || || || || || | || || |||||||| || || | ||| ||
Sbjct 2772778 ACCACCGCAC-GTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAG 2772836
Query 153057 CGTACA 153062
|| ||
Sbjct 2772837 TGTGCA 2772842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215828995000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |