Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq23 105 5e-18 >seq23 Length=400117 Score = 105 bits (116), Expect = 5e-18 Identities = 400/632 (63%), Gaps = 29/632 (5%) Strand=Plus/Plus Query 29622 TGGGCTCCCTCTCGAGCTGAATCCT-CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680 ||||||||||| | ||||| |||| || || || || ||||| |||||||| |||| | Sbjct 229094 TGGGCTCCCTCACCAGCTGC-TCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGAGTA 229152 Query 29681 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29740 || |||| || || ||||| || || | || | | ||||| ||||| | Sbjct 229153 TCACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGG 229212 Query 29741 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTC 29800 || | ||| | |||| ||| || || || ||||| ||||| | | ||| | || | | Sbjct 229213 GTCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGC 229272 Query 29801 TGGTAGAGCTGGCAC--GAGA----------GCTCT---CC------GTCGCTCACGTAA 29839 |||||||||||||| |||| | ||| || || | ||||| Sbjct 229273 TGGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAG 229332 Query 29840 AACTGAC---ACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTC 29896 ||||| |||| ||| || || || |||||||| | || ||||||| Sbjct 229333 AACTGGGCGAACAT---ATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTC 229389 Query 29897 CAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTT 29956 ||||| | || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 229390 CAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCG 229449 Query 29957 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCG 30016 ||||| || || || |||| |||||| | || Sbjct 229450 GCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCG 229509 Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||| |||||||||||||| || ||||| || || | || | ||| || | | Sbjct 229510 AAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGG 229569 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||| | || || | | |||||| ||||||||||||| || || | ||| Sbjct 229570 CCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCG 229629 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 |||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 229630 GAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCG 229689 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||||| | |||||| || |||||||| Sbjct 229690 CGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 229721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163076247150