Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002007945.1_202017-02-28] 25 sequences; 38,507,590 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq23 132 4e-26 >seq23 Length=400117 Score = 132 bits (146), Expect = 4e-26 Identities = 410/633 (65%), Gaps = 31/633 (5%) Strand=Plus/Plus Query 27116 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 27175 ||||||||||| | ||||| || || || || || || ||||||||||| |||| | Sbjct 229094 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGAGTAT 229153 Query 27176 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 27235 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 229154 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 229213 Query 27236 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 27295 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 229214 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 229273 Query 27296 GGTAGAGCTGACAC--GAGA----------GCTCT---CCATCGCTT------ACGTAAA 27334 |||||||||| || |||| | ||| |||| | ||||| | Sbjct 229274 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 229333 Query 27335 ACTG-----ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 |||| ||||||| | ||| ||||| ||||| | || |||||| Sbjct 229334 ACTGGGCGAACATATGACAAGGCG-GGAGG----GCCATCTTCTTGAGATCGGCGGGGTT 229388 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 |||||||| || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 229389 CCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTC 229448 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||||| || || || |||| |||||| | ||| |||||| || || Sbjct 229449 GGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCC 229508 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 ||| || | |||||||||||||||||| || ||||| || || | || | ||| || | Sbjct 229509 GAAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAG 229568 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 ||| |||||| | || || | | |||||| ||||||||||||| || || | || Sbjct 229569 GCCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTC 229628 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 229629 GGAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGC 229688 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||| | |||||| || |||||||| Sbjct 229689 GCGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 229721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507087415775