Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05]
77 sequences; 37,128,894 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 6e-23
>seq2
Length=3801342
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| || ||| |||||||| |||||||| ||||||| ||| | ||
Sbjct 3207086 AGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCT 3207145
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||||||||| ||||||||||| || | | ||| || ||
Sbjct 3207146 TCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCT 3207205
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | || | |||| |||| ||||| || |||| ||| || ||
Sbjct 3207206 TGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTC 3207265
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||||||||| || || || ||||||||
Sbjct 3207266 TTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 3207297
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | ||| |||| |||||| || || || ||||| || |||||||| ||
Sbjct 3206842 TCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGA 3206901
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| || | || || | ||||||||| || || || || || |||||||| |||
Sbjct 3206902 GAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGG 3206961
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| |||||| ||| | | | | || | || | ||| ||
Sbjct 3206962 AATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAAC 3207021
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||| || ||||| ||||| || || || |||||||||||
Sbjct 3207022 TTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 3207069
Score = 98.7 bits (108), Expect = 6e-16
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || |||| | ||| |||| ||| | |||| ||| ||||| ||||||||||| |||
Sbjct 3207299 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 3207358
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||| || | |||||||||||| |||
Sbjct 3207359 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 3207418
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| || || ||||| || ||||| ||| | | | | || | |||| | || || |
Sbjct 3207419 ATGCCTTCTTTGTC--CTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 3207476
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | ||||| || || || ||||| || |||||
Sbjct 3207477 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 3207513
Score = 86.0 bits (94), Expect = 4e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||| ||||| || || |||| | || || | ||||||||| |||||
Sbjct 3207637 TCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAG 3207696
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| || | || ||||| || ||||| ||| | | |
Sbjct 3207697 ATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGCTCTTGACGTTG 3207756
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGT 34365
| || | ||| |||| ||||| |||| |||||||| ||||||||
Sbjct 3207757 TCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 3207803
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||| ||||| | || || ||||| ||||||||||| ||
Sbjct 1825967 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1825908
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| || | ||||||||| ||||| || || ||||||||||| |||
Sbjct 1825907 AGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGG 1825848
Query 34283 ACGCTCTCCTTGTC 34296
| | |||||||||
Sbjct 1825847 ATTCCCTCCTTGTC 1825834
Score = 84.2 bits (92), Expect = 1e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||| ||| ||| | || || | |||||| || ||||| ||
Sbjct 2556030 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 2555971
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| |||||||||||| ||| | | ||||||||| ||||| ||| | | | |
Sbjct 2555970 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 2555911
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380
|| | ||| |||| || ||||| | || ||||| || || ||||| || || || ||
Sbjct 2555910 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2555852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071696817120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |