Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 123 2e-23 seq2 93.3 4e-14 >seq7 Length=2086428 Score = 123 bits (136), Expect = 2e-23 Identities = 224/324 (69%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || || |||||| | || || ||| || Sbjct 1171722 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTATCTTCTGGCTG 1171663 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| |||||||||| || || || ||||||| | || || || || ||| Sbjct 1171662 AAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATGAG 1171603 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA-TAAACCGACGC- 58158 |||||||| ||||| ||||| ||||| | | ||| ||| | ||| ||||| | Sbjct 1171602 GGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCGACCCT 1171543 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||| | | |||| ||||| || || ||| | || || || ||||| | || | Sbjct 1171542 CAGATTG--TGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTGACTG 1171485 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | || || || || | || || |||||| | ||||||| |||||||||||| Sbjct 1171484 ACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATTGAGT 1171425 Query 58279 TTGTTGCCGACAGACTTTTGCTCG 58302 | || |||||| | || || ||| Sbjct 1171424 TCGTCGCCGACCGTCTCCTGGTCG 1171401 >seq2 Length=3801342 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || || || || |||||| | || ||||| | ||| | ||| Sbjct 3207515 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCG 3207456 Query 31263 A-AACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | |||| | || || | ||| |||||| |||||| | || ||||||||||||||| | Sbjct 3207455 ACAACGTT--AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTT 3207398 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || ||| | ||| || || || |||||||| || Sbjct 3207397 GATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAA 3207338 Query 31381 AGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || |||| || Sbjct 3207337 GGAATCTACTCTCCACTTGGTTCT 3207314 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || || || | || |||||| | ||| Sbjct 3207297 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 3207238 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | | | || || || | || || ||||| Sbjct 3207237 GACACGATCGATAATGTGAAGTCAAAGATTCAAG-ATAAAGAGGGAATTCCTCCTGACCA 3207179 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | ||||| ||| || |||||| || Sbjct 3207178 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAA 3207119 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || ||||| || || Sbjct 3207118 CATCCAGAAAGAGTCTAC 3207101 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 2555851 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 2555910 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 2555911 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 2555970 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| || || ||| | || || || ||||||| || ||||| || || Sbjct 2555971 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2556030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765970949840