Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 190 3e-44 seq3 188 1e-43 >seq9 Length=2037592 Score = 190 bits (210), Expect = 3e-44 Identities = 201/262 (77%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 1737781 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCCA 1737723 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 1737722 TCCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1737663 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| |||| | ||| |||||| || |||| || | |||||| | ||| |||| Sbjct 1737662 CTCGTGGTGTTCTCAAGTCCTTCCTTGAGTCCGTCATTCGTGATGCCGTTACCTACACCG 1737603 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| |||||||| |||| | ||||| || | || || || | Sbjct 1737602 AGCACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTGGTCTACGCCCTCAAGCGCCAGG 1737543 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 1737542 GCCGTACCCTCTACGGTTTCGG 1737521 >seq3 Length=2681840 Score = 188 bits (208), Expect = 1e-43 Identities = 192/248 (77%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 1438402 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1438344 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 1438343 TCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 1438284 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||| ||| || ||| || | Sbjct 1438283 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 1438224 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || |||||||||| | || ||||||| Sbjct 1438223 AGCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTCGTCTATGCCCTCAAGCGTCAAG 1438164 Query 16671 GCCGTAAG 16678 | ||| || Sbjct 1438163 GACGTGAG 1438156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075129598361