Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7 141 2e-28 seq15 114 3e-20 seq1 114 3e-20 >seq7 Length=2086428 Score = 141 bits (156), Expect = 2e-28 Identities = 274/401 (68%), Gaps = 4/401 (1%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||| || ||||| ||| Sbjct 1171313 TCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTG 1171372 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | |||| | |||||| || || | || ||||| || || ||||| | Sbjct 1171373 GCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATG 1171432 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| | ||||||||||||| | | ||||||| || ||| | | Sbjct 1171433 TACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGG 1171492 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGAC-A 251800 || ||||| || ||| || || ||| | | || ||| ||| | || || | | Sbjct 1171493 AACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTCCTCCACAATCTG--AGGGTCGG 1171550 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | ||| | ||| | ||| | || || |||| | ||| |||||||| || | Sbjct 1171551 GGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCAC 1171610 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||| | ||||||||| | || || ||||||| ||||| ||| | ||||||| Sbjct 1171611 GAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGA 1171670 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||| | | ||||||||| ||||| | | |||||| ||| Sbjct 1171671 AGATAGAGGCAAAGGATCCGGAGAAGAAGATACCCTCAACA 1171711 >seq15 Length=1617427 Score = 114 bits (126), Expect = 3e-20 Identities = 412/636 (65%), Gaps = 14/636 (2%) Strand=Plus/Plus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||||||| ||||||| | ||| |||| |||| | ||||| || || | Sbjct 706351 GATGAGCGCAAGGAGTGGCTGCGTCAATTCAAGCCGGGAACCTTCTTGGATCACTCAGTG 706410 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| || | | | ||||||||| ||||||||||||| || ||| | |||| | Sbjct 706411 TCCAAGATTTCATACACCGACTTCATCAACAAGGAGCTCATCCTATTCAGTATGGCGG-A 706469 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 |||| || || ||||| || ||||||||||||||||| || |||||| | Sbjct 706470 CAATGT---CCGATCGATTCCTTCGGTCGTGGATGGCCTCAAGCCCGGTCAACGTAAGGT 706526 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || | | | ||| || |||||| | || || ||||| | | || | || Sbjct 706527 TCTTTATACTTGTTTCCGACGCAACCTGAAGAAGGATATGAAGGTGGTCGAATTAGCGGG 706586 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | | || || | || ||| || || |||||||| |||||| |||| || Sbjct 706587 TCACGTTTCGGGTATGACTGCGTATCAACACGGTGACATCTCCCTGCAGCAGACCATCGT 706646 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 ||| |||||||| || || || ||||| | |||| ||| |||| ||| | Sbjct 706647 CGGCCTGGCACAGAGCTTCGTCGGGTCCAACAATGTAAACTGTCTGGAGCCCAGTGGTAA 706706 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| |||||| ||||||| || |||| ||| | ||||||| || Sbjct 706707 CTTTGGTAGTCGTCTCCAGGGTGGATCAGACTGTGCCAGTGCTCGTTATATCTACACTCG 706766 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTA 218912 ||||| |||| ||| | | ||| || || || |||||| | ||| |||| || Sbjct 706767 CCTGTCG-CCGT-TCGCTCGACGTG-TCTTCCATGCTCATGATGATCCTCTACTTACTTA 706823 Query 218913 TCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||||| |||||| || ||||| || || ||||| | |||| | | Sbjct 706824 CAACGAGGATGATGGTGAAAAAATCGAGCCGGAAATCTACGTGCCCGTCGTTCCCATGAT 706883 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 || || || ||||| | |||||||| || || | ||| | ||| ||| ||||| Sbjct 706884 CCTGGTTAACGGTGCTGACGGTATCGGCACCGGCTGGAGTTCATCCATCCCTAACTACAA 706943 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| |||||||| | |||||| | ||||| ||||| Sbjct 706944 CCCCGAGGACATCGTGGACAACCTTAAGCGACTCAT 706979 >seq1 Length=4444644 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| |||| ||| Sbjct 3327308 GGTGAGGATCTGTGCAACTGCACGTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 3327249 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | |||||||| | || || |||||| |||||||||| || | Sbjct 3327248 CAGACCCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTACT 3327189 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || |||| ||||| || || || || || Sbjct 3327188 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 3327129 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 3327128 GATGAGGTCAAGACTGTCTACGTTGAGCACGACTTGGATTC 3327088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835785974757