Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 125 7e-24 >seq2 Length=3801342 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| |||||||||||| Sbjct 3207101 GTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCG 3207160 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| ||||||||||| ||||||||||| ||||| ||||| || ||| ||| Sbjct 3207161 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTTC 3207220 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||| ||||| | ||| Sbjct 3207221 ACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTC 3207280 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 3207281 TTGACGAAAATCTGCAT 3207297 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||| ||||| |||| || ||||| | || || ||||||||||| ||| | Sbjct 3206879 TCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAG 3206938 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || || |||||||| || ||||| || || || ||||| || ||| ||| || Sbjct 3206939 ATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 3206998 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || ||||| | ||| | |||||||| || | || || ||| Sbjct 3206999 TCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACG 3207058 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 3207059 AAGATCTGCAT 3207069 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | || || | || | || ||||| || ||||||||||| || | Sbjct 3207298 ACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGA 3207357 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||| || || | || | |||||||||||||| || Sbjct 3207358 CAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGG 3207417 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| |||||||| || || ||||| Sbjct 3207418 AATGCCTTCTTTGTCCTGGATTTT 3207441 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || ||||| || || | || ||| || | || Sbjct 3207615 AAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATC 3207674 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||| || | || || ||||||||||| |||||||| ||||| || || Sbjct 3207675 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 3207734 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | | || || || | ||| | ||| Sbjct 3207735 CTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGT 3207794 Query 64411 CTTGCCGGT 64419 ||||||||| Sbjct 3207795 CTTGCCGGT 3207803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644319091880