Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05]
77 sequences; 37,128,894 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 7e-24
>seq2
Length=3801342
Score = 125 bits (138), Expect = 7e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || ||||| || ||||||||||| | | ||||| | ||||| ||||||||||||
Sbjct 3207101 GTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCG 3207160
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| ||||||| ||||||||||| ||||||||||| ||||| ||||| || ||| |||
Sbjct 3207161 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTTC 3207220
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || || | || | ||||| ||||| | |||
Sbjct 3207221 ACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTC 3207280
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 3207281 TTGACGAAAATCTGCAT 3207297
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || ||||| ||||| |||| || ||||| | || || ||||||||||| ||| |
Sbjct 3206879 TCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAG 3206938
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || || |||||||| || ||||| || || || ||||| || ||| ||| ||
Sbjct 3206939 ATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 3206998
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || ||||| | ||| | |||||||| || | || || |||
Sbjct 3206999 TCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACG 3207058
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 3207059 AAGATCTGCAT 3207069
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || ||||| | || || | || | || ||||| || ||||||||||| || |
Sbjct 3207298 ACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGA 3207357
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || |||| || |||||||| || || | || | |||||||||||||| ||
Sbjct 3207358 CAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGG 3207417
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
||| |||||||| || || |||||
Sbjct 3207418 AATGCCTTCTTTGTCCTGGATTTT 3207441
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || || || ||||| || || | || ||| || | ||
Sbjct 3207615 AAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATC 3207674
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||||| || | || || ||||||||||| |||||||| ||||| || ||
Sbjct 3207675 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 3207734
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | || || | | || || || | ||| | |||
Sbjct 3207735 CTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGT 3207794
Query 64411 CTTGCCGGT 64419
|||||||||
Sbjct 3207795 CTTGCCGGT 3207803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644319091880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |