Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7 149 8e-31 seq4 113 6e-20 >seq7 Length=2086428 Score = 149 bits (164), Expect = 8e-31 Identities = 312/460 (68%), Gaps = 19/460 (4%) Strand=Plus/Plus Query 127221 CCAGCTTGCCG-TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTG 127279 ||||||| | | || || ||||| ||||||||||||||||| ||||| || | ||| | Sbjct 1171283 CCAGCTTTCTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAG 1171342 Query 127280 ATATTCTCCATAAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGCACCCCAA 127334 || || ||||| || ||||||||||| | |||| | | |||||| |||| Sbjct 1171343 ATGTTGTCCATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAA 1171397 Query 127335 TCTGTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCA 127394 |||||||| || | |||| |||||||||||| ||||| | ||||||| Sbjct 1171398 GAGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCA 1171457 Query 127395 TACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTT 127454 | || | || || || || ||||| | |||| ||||||||||| ||||||| Sbjct 1171458 TGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTT 1171517 Query 127455 CCCGTACGATGGCGTGA---ATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAG 127510 || ||||| ||| | | | | | || | ||| | | || | |||| Sbjct 1171518 CC---ACGATAACGTCCTCCACAATCTGAGGGTCGGGGCGGTTGT-TCAGGTGCGAGAAG 1171573 Query 127511 AGTTCCACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAG 127570 || |||||| || |||||||||||| ||||| ||||| || || || ||||| Sbjct 1171574 AGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAAT 1171633 Query 127571 CACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAG 127630 ||||| ||||| | || |||||||||| |||||| || | ||| || || ||| Sbjct 1171634 GTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAG 1171693 Query 127631 AAGAAGATCCCCTCCACACACGCGAACGCAAATAGACGCT 127670 |||||||| ||||| ||| ||||| || | ||||||| Sbjct 1171694 AAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCT 1171733 >seq4 Length=2630140 Score = 113 bits (124), Expect = 6e-20 Identities = 575/907 (63%), Gaps = 26/907 (3%) Strand=Plus/Minus Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 ||| ||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 2394729 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 2394670 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 115835 || |||||||| || | | |||| | | |||||| | | ||||| ||||||| Sbjct 2394669 GACGGAGCCACC---CTCGGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 2394613 Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 115892 | | |||| ||| || | ||||| || ||||||||||| ||| Sbjct 2394612 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 2394556 Query 115893 GCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 115952 || | |||||||| | ||||| ||||| |||||||| ||| |||||||| || Sbjct 2394555 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 2394496 Query 115953 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCT 116012 ||| || || |||||||| |||| || | ||||||||| | ||| | Sbjct 2394495 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 2394436 Query 116013 AATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TCCCACATAT 116071 || | ||||| ||||||||||| || || | || || |||||||| | Sbjct 2394435 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 2394377 Query 116072 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 116131 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 2394376 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 2394317 Query 116132 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 116191 ||| |||| || || || | ||| |||| || || ||||| || || | | Sbjct 2394316 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 2394257 Query 116192 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCG 116251 || | ||| |||||| || || || | | ||| || || |||| | Sbjct 2394256 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 2394197 Query 116252 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 116311 | ||||| | |||||| || |||| ||||| || | ||| || | ||| | | || Sbjct 2394196 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTT-GCTGTTCTTG--GCCT 2394140 Query 116312 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 116368 | || || || |||| ||||||| | | | || || || | |||| Sbjct 2394139 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 2394080 Query 116369 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 116425 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 2394079 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 2394023 Query 116426 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 116485 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 2394022 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 2393963 Query 116486 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 116545 |||| ||||| | || || || || || |||| |||||| || || |||| ||| Sbjct 2393962 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 2393903 Query 116546 TACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 116605 |||| ||||||||||| ||||| | || | || ||||| || || | || ||||||| Sbjct 2393902 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 2393843 Query 116606 CCTTCCA 116612 | | ||| Sbjct 2393842 CATACCA 2393836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506609499320