Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 >seq2 Length=3801342 Score = 118 bits (130), Expect = 1e-21 Identities = 172/239 (72%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| || || || | | ||||| |||| || || || |||||||| || ||||||| Sbjct 3206835 ATTAGTTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGT 3206894 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || || ||||| | || || ||||||||||| || || || | || ||||||| Sbjct 3206895 AGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGT 3206954 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | ||||||||| |||||| ||||| ||| | | | ||||| | Sbjct 3206955 CTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAG 3207013 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||| || |||| ||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 3207014 CT---TTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 3207069 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| |||||||| | Sbjct 2556032 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 2555973 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | | |||||||||| |||||| ||||| ||| | Sbjct 2555972 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 2555914 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || ||||| || || || || Sbjct 2555913 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 2555854 Query 46583 AA 46584 || Sbjct 2555853 AA 2555852 Score = 113 bits (124), Expect = 5e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||| || || || || | || || ||||||||||| ||||| Sbjct 3207636 CTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 3207695 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || ||||| ||| ||||| |||||| ||| Sbjct 3207696 GATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGCTCTTGA-CGT 3207754 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||||||||| || || |||| |||||||| ||||| || Sbjct 3207755 TGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 3207803 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||||||| ||| || ||||| ||||| ||||| | |||||| | || ||| Sbjct 3207089 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCG 3207148 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| || | ||||||||||| | || | | ||| || || Sbjct 3207149 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGA 3207208 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||||||| ||||| || |||| ||| || || || Sbjct 3207209 ATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTT 3207268 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || ||||| Sbjct 3207269 CCGGTGAGAGTCTTGACGAAAATCTGCAT 3207297 Score = 102 bits (112), Expect = 9e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| || ||||| || |||| ||||||||||| || ||||| Sbjct 3207335 TCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAG 3207394 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||||| || | || || |||||| ||| || |||| | ||| Sbjct 3207395 ATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCCTGGATTTTGCTCTT-AACGTT 3207453 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || || || || | ||||| || || || || || || || || Sbjct 3207454 GTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 3207513 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||| ||||| Sbjct 1825932 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 1825873 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 1825872 GATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 1825834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237855958040