Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq9 129 7e-25 seq4 114 2e-20 seq2 100 3e-16 seq7 89.7 6e-13 >seq9 Length=2037592 Score = 129 bits (142), Expect = 7e-25 Identities = 286/419 (68%), Gaps = 25/419 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | ||||| | || |||| |||| | ||||||| | Sbjct 617894 CGATCGAAACGTCCAGGCCGCATCAGAGCCTTGTCCAGAACATCGGGTCTGTTTGTACCA 617835 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | | |||| ||| |||||| |||||||| || |||| |||| Sbjct 617834 GCCAAGACAACCA---CTTGCTCAGAGGTGTTGAAACCATCCATTTCAGTAAGAATCTGG 617778 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT--GCCGAAC---GCT-TC 11673 || | ||| ||||||||||| || |||||| || | ||| || Sbjct 617777 TTCAGCGTGCTCTCACGCTCATCATTTCC------ACCACCAAAGCTTTGCTTTGCTCTC 617724 Query 11674 ---TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||||| | || || |||||||| ||||| | ||| || || ||| ||| || Sbjct 617723 GATTTACCTATGGCATCGATCTCATCAATGAAGATGATGCAAGGCGTGTTCTTACGAGCA 617664 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | | || || ||||| ||||| | ||||||||| ||||||||||||||||| | | Sbjct 617663 TTGGCAAAGAGATCACGGACACGGGAAGGTCCAACACCAACGAACATCTCAACGAACTCT 617604 Query 11791 GCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAG-CGATGGCTCGAGCGAGGA 11848 | || || || || ||| |||||| ||| ||||| | || || || | || || | Sbjct 617603 GAACCACTGACGCT-AAAGAACGGAACACCAGATTCACCGGCCGTTGCCTTG-GCAAGCA 617546 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 | |||||||| ||||| || | ||||| |||| ||| || || || ||||| |||||| Sbjct 617545 GTGTCTTACCAGTACCGGGAGGACCAGAAAGAATGGCACCGCGAGGAATCTTAGCACCA 617487 >seq4 Length=2630140 Score = 114 bits (126), Expect = 2e-20 Identities = 428/665 (64%), Gaps = 7/665 (1%) Strand=Plus/Minus Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGG 110590 |||||||||| | || || ||||| | | || |||| || ||||||||||| | Sbjct 2393716 CCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAG 2393657 Query 110591 ACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGA 110650 ||| | || | ||||| | ||||||||||| ||| ||| |||| | || ||| Sbjct 2393656 TCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGA 2393597 Query 110651 AAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCA 110710 | || || ||| | | || || | ||| ||||| ||| || || | || || | Sbjct 2393596 AGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGA 2393537 Query 110711 TGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA---CCCG 110767 || ||| | |||||| || || | || | || | | || ||| || Sbjct 2393536 AGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTC 2393477 Query 110768 CCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGG 110827 |||||| ||||| | || ||| ||||| |||| |||||| |||| ||| |||| || Sbjct 2393476 CCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGG 2393417 Query 110828 ATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATAC 110887 | ||| || ||||| | ||| ||| | ||||| ||| ||| | || | || Sbjct 2393416 AGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTGAGAC 2393357 Query 110888 CAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCA 110946 | || ||||| || ||| || |||||| ||| |||| || |||||||||| Sbjct 2393356 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCT-TGAGCGTGTCATAAATACCT 2393298 Query 110947 TCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTT 111006 || || ||| |||| | | | |||||||| |||| | |||||| |||| || Sbjct 2393297 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 2393238 Query 111007 CCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTA 111065 || |||||||| | || || | ||||| |||| | || | || |||||| || || Sbjct 2393237 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAA-ATACTTCTGAGACATCAAGTGATA 2393179 Query 111066 TGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACAT 111125 || |||| || | || ||||| |||||||||| | || ||||| || | Sbjct 2393178 GGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 2393119 Query 111126 ATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGT 111185 | ||||| ||| | ||||||||||| || | | ||| | ||| || || Sbjct 2393118 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAGT 2393059 Query 111186 CTTGA 111190 ||||| Sbjct 2393058 CTTGA 2393054 >seq2 Length=3801342 Score = 100 bits (110), Expect = 3e-16 Identities = 267/408 (65%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| ||||| | ||| |||||||||||||| | ||||||| | ||| ||| Sbjct 2869745 GAATCCGTCAAGTTCCGTGAGAAGCTGGTTCAGTGTCTGTTTAA---CAT------AGGC 2869795 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711 | | | | | | | |||| ||| | || || | |||||| ||||| | |||| Sbjct 2869796 CGCATCCCTTTCGTTCCTCTTCGCACCTATGGCATCCAGCTCATCAATGAAGATGATAGC 2869855 Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771 ||| ||| ||||| || ||| |||||||| |||||||| || || ||||| || Sbjct 2869856 AGGTGCCTTGCTTCGTGCTTGAGTGAACAGTTCACGGACACGCTTGGCACCTACACCAAC 2869915 Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831 | ||| || |||| | | |||| | | ||| || ||| || ||| || || Sbjct 2869916 GTACACTTCGTCGAACTCAGAACCAGACATGTAGAAGAAAGGCACACCAGCCTCTCCTGC 2869975 Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACG 11891 | ||| || || || || ||||| || |||||||| | ||| | ||||| |||| Sbjct 2869976 TACGGCACGGGCCAGCAGCGTCTTTCCGGTACCAGGAGGGCCAACAAGAAGCACGCCCTT 2870035 Query 11892 GGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTC 11951 || | |||| ||||| | | || || || ||| ||||| || || | ||| Sbjct 2870036 CGGCAACTTGCCACCAAGAGAGGAAAATCGTTCTGGGTTCAGCAGGAATTCAACCAGCTC 2870095 Query 11952 CTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 || |||||| ||||| || |||| || | ||||||||||| || Sbjct 2870096 CTGAAGTTCTTCCTTAGCTTCGTCGCAGCCATGCACATCGGTGAATCG 2870143 >seq7 Length=2086428 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1261779 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 1261838 Query 136777 GGGAACAGCTTTTA 136790 |||| || ||||| Sbjct 1261839 GGGATCATTTTTTA 1261852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975433110600