Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 114 2e-20 seq7 109 6e-19 seq9 82.4 9e-11 >seq4 Length=2630140 Score = 114 bits (126), Expect = 2e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 2394023 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 2393964 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| |||||| || Sbjct 2393963 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 2393904 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 || || ||||||||||| |||||| | || | || ||||| ||||| | || ||||| Sbjct 2393903 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 2393844 Query 106637 GCCTTCCA 106644 || | ||| Sbjct 2393843 GCATACCA 2393836 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 2393723 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 2393664 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 2393663 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 2393604 Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 2393603 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 2393544 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 106939 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 2393543 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 2393487 Query 106940 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 106993 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 2393486 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 2393427 Query 106994 ATACCAT 107000 ||||||| Sbjct 2393426 ATACCAT 2393420 >seq7 Length=2086428 Score = 109 bits (120), Expect = 6e-19 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || || || |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 1171295 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 1171354 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 1171355 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 1171412 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||||||||||| | ||||| | |||||||| || | ||| | Sbjct 1171413 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 1171472 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 1171473 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 1171529 Query 117224 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | | | | | ||| | || || | ||||||| ||||| | Sbjct 1171530 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 1171589 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||||||||||||||| || || ||||| || || ||||| || || ||||| | Sbjct 1171590 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 1171649 Query 117341 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 || |||||||||| ||| | |||| | || || |||||||||||||||||||| | Sbjct 1171650 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATACCCTCAA 1171709 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || || || | || |||| |||||| Sbjct 1171710 CAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 1171742 >seq9 Length=2037592 Score = 82.4 bits (90), Expect = 9e-11 Identities = 215/326 (66%), Gaps = 19/326 (6%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 ||||||||||| || || | || ||||| | || || || |||||||| | Sbjct 617804 AAACCATCCATTTCAGTAAGAATCTGGTTCAGCGTGCTCTCACGCTCATCATTTCC---- 617749 Query 9342 ATACCACCA--GCACTGCGTTGCTTTC-------CCACGGCATCAATCTCATCAATGAAG 9392 ||||||| || ||| ||||| || | | |||||| ||||||||||||||| Sbjct 617748 --ACCACCAAAGCTTTGCTTTGCTCTCGATTTACCTATGGCATCGATCTCATCAATGAAG 617691 Query 9393 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 | || || || || | || || | |||||||||| || || | | || Sbjct 617690 ATGATGCAAGGCGTGTTCTTACGAGCATTGGCAAAGAGATCACGGACACGGGAAGGTCCA 617631 Query 9453 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9510 |||||||| |||||||| || || | || | | || | | ||| || ||| || Sbjct 617630 ACACCAACGAACATCTCAACGAACTCTGAACCACTGACGCT--AAAGAACGGAACACCAG 617573 Query 9511 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9570 ||||||| || | || ||| || || |||||||| ||||| || ||| | || | Sbjct 617572 ATTCACCGGCCGTTGCCTTGGCAAGCAGTGTCTTACCAGTACCGGGAGGACCAGAAAGAA 617513 Query 9571 GGGCACCCCGTGGAATCTTGGCGCCA 9596 |||||| || |||||||| || ||| Sbjct 617512 TGGCACCGCGAGGAATCTTAGCACCA 617487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980232143480