Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=3801342 Score = 109 bits (120), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||||| || |||||||| || ||||| || || | ||| |||| || Sbjct 3206861 ACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCT 3206920 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || |||||||||||| | || | ||||||||||| Sbjct 3206921 AGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 3206980 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| ||||| | | ||||| | ||| || ||||| || | || || || Sbjct 3206981 ATCTTTGACTTGAC----GTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGT 3207036 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || |||||||||||| Sbjct 3207037 CTTGCCAGTGAGCGTCTTAACGAAGATCTGCATA 3207070 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||| | || |||| || ||||| || ||||| || || Sbjct 2556030 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 2555971 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| ||||| |||||| | Sbjct 2555970 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 2555911 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 || | || | | |||||| |||| ||| ||||| || |||||||| ||||| || || Sbjct 2555910 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2555852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633295351656