Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 113 8e-20 >seq7 Length=2086428 Score = 113 bits (124), Expect = 8e-20 Identities = 289/446 (65%), Gaps = 5/446 (1%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| || ||||| ||||| ||||| ||| ||| || ||||| | | Sbjct 1171733 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTTGCCTCTA 1171674 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||| ||| || || |||||||| || ||| || ||||||||||| ||| Sbjct 1171673 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCT-TACATTCTCCAACGAGCTTATC 1171615 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || ||||||||||||| || ||||| |||||||||| | || ||| || | Sbjct 1171614 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCTGAAC 1171558 Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || | ||| || | | ||| || ||||| || |||||| Sbjct 1171557 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 1171498 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| || | ||| || Sbjct 1171497 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGC 1171438 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || |||||||||| || ||||||| ||| ||| | || || | || || | Sbjct 1171437 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTC 1171378 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | | | ||||| || ||||| ||||| ||||| || ||| || |||||||||||| Sbjct 1171377 AATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTC 1171318 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | ||||| || || || Sbjct 1171317 TTCGAGAAGCGTGTCGGTGATTACCA 1171292 Score = 93.3 bits (102), Expect = 8e-14 Identities = 179/260 (69%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 1172188 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 1172129 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC-TCA 25591 | ||||| | ||| |||| || || || | ||||||| || | ||| || Sbjct 1172128 TCTAAGGATCTTCACGACTGGCACAACCGC-CTGAATGATGACGAGC-GCTTCTTCATCT 1172071 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||| | || |||||||| ||||| || || || || ||||| || ||| |||| Sbjct 1172070 CTCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGC 1172011 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | | || |||||| | ||||| || ||||||||||||||||| | Sbjct 1172010 GTTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGA 1171951 Query 25712 TCGAAAATGTGCACTCTGAG 25731 |||| || | ||| ||||| Sbjct 1171950 TCGAGAACATCCACGCTGAG 1171931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843905986880