Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq7 109 7e-19 >seq4 Length=2630140 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||||| || | ||||| ||||||||| Sbjct 2393836 TGGTATGCTATTCTGGAGGCTCAGACCGAGACTGGAAATCCTTTCATGCTGTACAAGGAT 2393895 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || ||||||| ||||| ||||| ||||| ||||||| ||| ||||| || || || Sbjct 2393896 GCCTGTAACAGAAAGAGCAACCAGAAGAACCTGGGAACGATCCGCAGCTCCAACCTCTGT 2393955 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || ||||| | |||||||| | | ||||||| ||||| ||||| | || || | Sbjct 2393956 ACTGAAATCATTGAGTACACTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 2394015 Query 76058 GCCCTTCC 76065 ||||| || Sbjct 2394016 GCCCTGCC 2394023 Score = 89.7 bits (98), Expect = 6e-13 Identities = 205/307 (67%), Gaps = 9/307 (3%) Strand=Plus/Plus Query 75522 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGG 75581 |||||||| |||| ||||| || || || ||| ||| || | |||||| | || | | Sbjct 2393420 ATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATATGTAGACCAGGGAG 2393479 Query 75582 G------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCA 75635 | ||||| ||| | | | || | |||||||| || ||||| |||||| || Sbjct 2393480 GAAACAAGCGTCC--AGGTG-CTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTCT 2393536 Query 75636 TGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCT 75695 | |||||||| || | || ||||| ||| | || || | | | ||||||| Sbjct 2393537 TCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAGCCCGCGATCTCT 2393596 Query 75696 TTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGT 75755 | | |||| |||| ||| ||| | ||||||||||| ||||| | || | ||| Sbjct 2393597 TCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGAAGCCAACGGCGACTGGA 2393656 Query 75756 CTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAG 75815 |||| |||||||| || |||| || || | |||| | ||||| || ||||| | Sbjct 2393657 CTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTATGGTGACGAATTTGAGG 2393716 Query 75816 CCCTCTA 75822 | ||||| Sbjct 2393717 CACTCTA 2393723 >seq7 Length=2086428 Score = 109 bits (120), Expect = 7e-19 Identities = 298/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||||| |||| || | || || || ||| |||||||||||||||||||| || | Sbjct 1171742 CCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCT 1171683 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 | | |||| | ||| |||||||||| || | ||||| || || ||||| || | Sbjct 1171682 TTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACG 1171623 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | ||||| || || ||||||||||||||| || ||||| ||||||| | Sbjct 1171622 AGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACC 1171563 Query 65249 TGCGTAATAGACCCACTACCGAAACTAT---CCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 || || | ||| | | | | | ||| |||||| || || || | Sbjct 1171562 TGAACAACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTG---GAAGCTGTCTCCA 1171506 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 ||||||| | |||| | ||||| || || || ||| | || |||||||| | Sbjct 1171505 TTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACT 1171446 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425 ||||| | |||||||||||| || | || |||||||| || || || Sbjct 1171445 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTT--GGCAACAA 1171388 Query 65426 CCATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 | | | | || || | || ||||||||||| ||||| ||||| ||| | || || Sbjct 1171387 CAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAA 1171328 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||| |||||||| || || || || Sbjct 1171327 GACCAACTTCTTCGAGAAGCGTGTCGGTGATTA 1171295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569025801760