Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 143 8e-29 seq2 98.7 3e-15 seq1 93.3 1e-13 seq7 86.0 2e-11 >seq4 Length=2630140 Score = 143 bits (158), Expect = 8e-29 Identities = 369/559 (66%), Gaps = 5/559 (1%) Strand=Plus/Minus Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACT-CCTCATCGCCGTGATTCTTCCGTAGCTCTAA 156001 |||||||| || || | || | | ||| |||| | ||||| ||||| || || || | Sbjct 2393603 GCATAGAAGAGATCGCGGGC-TCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAG 2393545 Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT 156061 ||| || | ||| | || ||||||| || || |||||| ||| | ||| Sbjct 2393544 GAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTT 2393485 Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 | || ||||| |||||||| | ||||| || ||||| || | ||||| |||| ||| Sbjct 2393484 GTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAAT 2393425 Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 ||||||||| | || ||||| || | ||| | || || | | || | || | Sbjct 2393424 ACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCAC 2393365 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238 || || || || ||||| | || || || || ||| ||| | || | | Sbjct 2393364 ATTGAGACCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATA 2393305 Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298 ||||||||| || ||| || | ||| | ||| |||| ||| | ||||| | Sbjct 2393304 AATACCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTG 2393245 Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATA 156358 || || ||||| ||||| | || || | ||||| | |||||||| | |||||| | Sbjct 2393244 AGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAA 2393185 Query 156359 ATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCAT 156418 | || ||||| || |||||||| | | || ||||||| | |||||| | ||| Sbjct 2393184 GTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCAT 2393125 Query 156419 CCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTC 156478 | | | ||||||||||| || ||| | ||||||||| || || | ||||| || || Sbjct 2393124 CAAAAGGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTC 2393065 Query 156479 CAGAGTTTTAAACCCGAAA 156497 ||||| || || |||||| Sbjct 2393064 AAGAGTCTTGAAGCCGAAA 2393046 >seq2 Length=3801342 Score = 98.7 bits (108), Expect = 3e-15 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 ||||| |||||||| ||| | || || |||||||||||||| ||||| |||||||| Sbjct 1309017 CGCTGGATATAACCGGTTTCTGCGGTCTTGACAGCTGTATCAATAAGACCCTCACGACCA 1308958 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAA 302713 |||| || |||||||| | ||| ||| || |||| | ||| ||||| |||| | Sbjct 1308957 GCCATGGCGTGGAAGAAAAACTCAGTGGGT-GTCAAGCCACGCAA-GTAGGAGTTCTCCA 1308900 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 | |||||||| | || || || | ||| ||| || || || |||| || | | || Sbjct 1308899 CAAAACCACGGGATTCTGGAGAGTAGTCATCCTTTGTGAAATGGGGCAAAGTACGATACT 1308840 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | ||| | |||||||| || || || ||| || || |||| | | | |||||| Sbjct 1308839 TGAAACCGAACGGGATACGTTTACCCTCGACGGATTGTTGACCCACGACAGCAGTCATCT 1308780 Query 302834 GCGAAATATT 302843 | || || || Sbjct 1308779 GGGATATGTT 1308770 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||| Sbjct 1309815 AGAATTTCCTTCAGACGAGGGACACCAAGTGTAACGTT---CTTGGACGAGACACCAGCA 1309759 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| || ||||| | || |||| |||||| |||||| || || || | Sbjct 1309758 AAATGGAAAGTGTTTAGAGTCATCTGCGTAGCTGGCTCTCCAATAGACTGGGCAGCGAGA 1309699 Query 301933 ATACCAACCATTTCTCC 301949 | ||||||||| || || Sbjct 1309698 ACACCAACCATCTCACC 1309682 >seq1 Length=4444644 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Plus Query 233276 CCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGAC 233335 |||| ||||||| ||| ||||||||||| ||||| | ||| |||||||| ||| || Sbjct 2135852 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 2135911 Query 233336 CTACCCTGGACTGTT---TGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 | ||||| ||||| |||||||| | | || || ||||| | |||||| ||| Sbjct 2135912 CGACCCT---CTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGC 2135968 Query 233393 ATTTTATCTTTAACCATATGCTTCAG 233418 || ||||||| |||||| ||||| || Sbjct 2135969 ATCTTATCTTGAACCATGTGCTTGAG 2135994 Score = 86.0 bits (94), Expect = 2e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 |||| | ||||| ||| ||||| ||||| ||||| | ||| |||||||| || || | Sbjct 2135852 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 2135911 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| | ||||||||||| || || | |||||| || || ||| | Sbjct 2135912 CGACCCTCTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGCATC 2135971 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||||| | ||||| |||||||| ||||||| | |||||| |||||| Sbjct 2135972 TTATCTTGAACCATGTGCTTGAGCTTCTGGTAGTAGATAGGACCGGTGAAGA 2136023 >seq7 Length=2086428 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA-CAAGCGTGCG 133495 ||||||| ||| ||||| ||||||||||||| ||||||||||| || | || || Sbjct 1171802 TTCCTTGCATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGT-CG 1171744 Query 133496 AGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCG 133555 | || | | |||||||| || || || | || ||||| || || ||| || | Sbjct 1171743 ACCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCC 1171684 Query 133556 TTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 || |||||| || ||||| || |||||||| | | || || || || || ||| Sbjct 1171683 TTTGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAAC 1171624 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || ||||| || | || |||| || ||||| || ||||| Sbjct 1171623 GAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 1171583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816147959949