Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-25 seq12 109 7e-18 seq7 98.7 1e-14 seq4 91.5 2e-12 >seq2 Length=3801342 Score = 132 bits (146), Expect = 6e-25 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || ||||||||| ||||||||||| | || ||||||||| Sbjct 204506 GACAGCATCGGCGGCACCGTAACGTGCGTGATCCGCAACGTGCCCGTCGGACTCGGCGAG 204565 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||| ||| |||||| ||||||||||| ||||| || || Sbjct 204566 CCCTGCTTCGACAAGCTCGAAGCCAAGCTCGCGCACGCCATGCTCAGCATCCCCGCAACA 204625 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| ||||| || ||| Sbjct 204626 AAGGGCTTCGAAATCGGC 204643 >seq12 Length=1882576 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| ||||| ||| || || ||| |||| |||||| | || || || Sbjct 163551 GCCGCCAACTACCTTGACATTAAGGGACTACTTGATGTTGGCTGCAAGACCGTTGCGAAT 163610 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || |||||||| || |||||||| || ||| || ||| Sbjct 163611 ATGATCAAGGGCAAGTCTCCTGAGGAGATTCGTAAGACCTTCAATATCCAGAACG 163665 >seq7 Length=2086428 Score = 98.7 bits (108), Expect = 1e-14 Identities = 165/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| ||||||||||| || | || ||||| ||||| Sbjct 1171294 GTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCAT 1171353 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACGCGAGCAGG 868816 | || ||||||| | ||| ||| ||| | | || |||||| | || || Sbjct 1171354 GAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCCAAGAGCGA--CCAGGAGA 1171411 Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GATGAGCG 868874 ||||||||||| ||||| |||||||||||||| | | || ||||||||| || ||||| Sbjct 1171412 CGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCG 1171471 Query 868875 CCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 | | || || | || ||| ||||| ||||| || ||| || || ||||| Sbjct 1171472 CAA--GGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCCACGAT 1171524 >seq4 Length=2630140 Score = 91.5 bits (100), Expect = 2e-12 Identities = 195/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || || | || |||| ||| || || ||||||||||| || | || ||||| Sbjct 2393475 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 2393416 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||||| || || | |||| | | || Sbjct 2393415 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTGAGACC 2393356 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 ||| || || || | ||| ||||| | || || ||| ||||||||||| || || || | Sbjct 2393355 GATTCCACCAGCGGTCTTCGAGATCAATGCACA-TGTCTTGAGCGTGTCATAAATACCTT 2393297 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| || ||||||| || || |||||||| || | || || || | || | Sbjct 2393296 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 2393237 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 | || ||||| | || |||| || |||||| ||| | | ||||| Sbjct 2393236 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACAT 2393188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107132881019409