Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4 143 3e-29 seq7 136 4e-27 seq2 120 3e-22 >seq4 Length=2630140 Score = 143 bits (158), Expect = 3e-29 Identities = 594/927 (64%), Gaps = 24/927 (3%) Strand=Plus/Minus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGC 148106 |||| ||||||| |||||||||| | || || ||||| || ||||| | | || ||| Sbjct 2394797 TTAAGCGACTGGGACTGGTCAATGTAGGCACCGCGGTCCGCAGCCATCTGCAAGA-TCGA 2394739 Query 148107 TTTATCTTC-ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTC 148165 | |||||||| | |||||||| || |||||||| |||| ||| Sbjct 2394738 ACGCTGGGAGATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGG 2394679 Query 148166 GATGCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAG 148225 |||| ||| || ||||| | | |||| || | || ||| | ||||| | || Sbjct 2394678 GATGTTCTGGACGGAGCCACCCTCGGCAATGATACGGTTCTTCATGTTGTCCGACCACAG 2394619 Query 148226 GTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAG 148285 || |||| || ||| | || || | | || || ||||| ||||| || || || Sbjct 2394618 ACCAAGGTCGACCAAGTCCTTGAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAG 2394559 Query 148286 CACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAAT 148345 || || || || | ||| || | || || || |||||||| |||||| || Sbjct 2394558 GACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGAT 2394499 Query 148346 CTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATT 148405 ||| ||| |||| || |||||| ||| || |||| |||||||| |||| | Sbjct 2394498 CTGACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTG 2394439 Query 148406 TTTTATTTTGCGCTTC-AGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACA 148464 || || ||||| ||||| ||||||||||||| | || ||| || ||||| Sbjct 2394438 GGCGATCTT-CGCTTTGAGAGCGTCCCAGTCCCAGAGATCAGTGGGGGTCCGGTCCCACA 2394380 Query 148465 TGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 |||||||||| |||||||| || |||| ||| || || || ||||| |||| Sbjct 2394379 TGTCGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGA 2394320 Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584 || ||||| || | || | || |||| ||| || |||||| |||| Sbjct 2394319 AGTCCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTT 2394260 Query 148585 GCCTGTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACG 148641 | |||| ||| || ||| |||| | ||| | |||| ||| || | || | Sbjct 2394259 GGGTGTTTAGCTGCTTCGC---CTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGG 2394203 Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701 | || || || || | || || | ||||||| ||||| |||||| | | | Sbjct 2394202 CATCAGCCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTG-TTCTTG 2394144 Query 148702 CGCTC-TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 ||| || || |||| ||| ||||||||||||| || || || |||| ||| Sbjct 2394143 GCCTCAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACC 2394084 Query 148761 TTTGTAATTCTGCGCAGCAATTCAAAATCGTACT---------TGTCATCTACGATGCAT 148811 | || | | | ||| |||| || || | |||| |||| | | Sbjct 2394083 TGCACAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGAAG-GT 2394025 Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871 || || ||| | |||||| || ||||| || || ||||||||| || ||||||| Sbjct 2394024 GGG--CAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCA 2393967 Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931 | ||| || | || || ||| || |||| |||| |||||| || |||||||| Sbjct 2393966 ATGATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTT 2393907 Query 148932 CTGTTGCACGCGTCCTTGTACAGCATG 148958 ||||| || || ||||||||||||||| Sbjct 2393906 CTGTTACAGGCATCCTTGTACAGCATG 2393880 >seq7 Length=2086428 Score = 136 bits (150), Expect = 4e-27 Identities = 343/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || || || ||| || ||||||| Sbjct 1171291 CTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTC 1171350 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || |||||| | || || ||||| || | ||| | || || || Sbjct 1171351 CATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAG 1171410 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||||| |||||| | | | ||||||||| || | || Sbjct 1171411 ACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGC 1171470 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || | || || | ||||||||||||||| || || ||| || | | | Sbjct 1171471 GCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTC 1171530 Query 120591 GAGCATAGTGT---GGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 || | | | || |||| |||| | | |||| | || |||||| || Sbjct 1171531 CTCCACAATCTGAGGGTCGGGGCGGTTGT-TCAGGTGCG-----AGAAGAGCAGGCAAGC 1171584 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 |||||| ||||| || ||||| || || || || ||||||||| || || || ||||| Sbjct 1171585 AAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGG 1171644 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||| | ||| | |||| | |||| || | ||||||| || || ||||| | || Sbjct 1171645 CATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATACC 1171704 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-GTCGATCC 120826 ||| || ||| ||||| || | |||| | || |||| | || || | | ||||| Sbjct 1171705 CTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGGTCGAC-TCCTGATCCTGGATCC 1171763 Query 120827 ACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | || ||||| || ||||| || || | ||| || Sbjct 1171764 AGCGGATAGCCCAGTCAGCCTTCTTACGAATGCAAGG 1171800 >seq2 Length=3801342 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||||||| || ||| | | | || |||||||||||||| Sbjct 3207101 GTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCA-TCTTCGAGCTGCTTGCC 3207159 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| ||||| || || || || || |||||| ||| Sbjct 3207160 GGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTT 3207219 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||||| | || || || | || | || || ||||| ||||| Sbjct 3207220 CACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGT 3207279 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 3207280 CTTGACGAAAATCTGCAT 3207297 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||| |||||||| || ||| | || Sbjct 2556030 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCAAGCTGCTTACCGGCGAAGAT 2555972 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || |||||||||||||| ||||| || |||||||| |||||| ||||| | || Sbjct 2555971 CAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTC 2555912 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| ||||||| ||| | ||| || || || || || || ||||| Sbjct 2555911 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2555852 Query 133652 A 133652 | Sbjct 2555851 A 2555851 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || |||| |||| ||| ||||| |||||||| || | |||| | | | ||||| || Sbjct 3206864 AAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCA-TCCTCTAG 3206922 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | || || || |||||||| || || || || |||||||| ||| Sbjct 3206923 CTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGAT 3206982 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | || | ||||| | | || || || | |||| || ||||| Sbjct 3206983 CTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGTCTTGCC 3207042 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 3207043 AGTGAGCGTCTTAACGAAGATCTGCAT 3207069 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| ||||| ||||||||||| Sbjct 3207673 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTA 3207732 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | |||||| | | ||| || || | |||| | Sbjct 3207733 TCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATG 3207792 Query 133626 GTTTTGCCGGT 133636 || |||||||| Sbjct 3207793 GTCTTGCCGGT 3207803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420334707480