Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 >seq2 Length=3801342 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || || || |||| || ||| || ||| Sbjct 3207294 CAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCCGAC 3207235 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||||||| ||||| |||||| || ||| || Sbjct 3207234 ACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAGCAG 3207175 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || |||||||| |||||| | |||||||| | |||||| ||||||||||| || Sbjct 3207174 CGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAACATC 3207115 Query 206353 CAGAAAGAGTCTAC 206366 |||||||||||||| Sbjct 3207114 CAGAAAGAGTCTAC 3207101 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || |||||||||||||| ||||| || ||||| |||| Sbjct 3207054 AAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAAAGCTCGGACACTATCGACAAC 3206995 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| || || || ||| || ||| ||| | |||||||| Sbjct 3206994 GTCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAACGTCTTATCTTT 3206935 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || |||||| | || |||||| | || | | || ||||| | ||||| ||| Sbjct 3206934 GCTGGCAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACAATATTCAGAAGGAG 3206878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819634059917