Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 161 1e-34 >seq4 Length=2630140 Score = 161 bits (178), Expect = 1e-34 Identities = 608/940 (65%), Gaps = 28/940 (3%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 2393714 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 2393655 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | | | |||||| ||||| || | || ||| |||| || || ||| || Sbjct 2393654 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 2393596 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | || ||| ||| || || || || || |||||||| ||||| | Sbjct 2393595 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 2393536 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| | ||||| || || | || || || | | || || || || |||||||| Sbjct 2393535 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 2393476 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 2393475 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 2393416 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||| || || ||| ||| || || | || || || | | || | ||| Sbjct 2393415 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 2393358 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | ||||| || | |||||||| ||||| Sbjct 2393357 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 2393298 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | |||||| || || | ||| | || || Sbjct 2393297 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 2393238 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 2393237 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 2393178 Query 70054 GTTTCAATAGCTGATTCTATATCCCACT--GATGAATTCCTATCGCGACACGCATCAACA 70111 || || ||||| |||| || || | |||||| || | | |||||||||||| | Sbjct 2393177 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 2393120 Query 70112 TATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 |||||||| |||| | ||| || || | || | || |||||| || | Sbjct 2393119 GGTGCTGAGGACGTTCAGCAACCTTTCCATCA---ATCCGAAGCAAGTATGACCGCTCAA 2393063 Query 70169 GAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 |||| || || || ||| ||||||| ||||| || | ||||| | |||| | || || Sbjct 2393062 GAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTT 2393005 Query 70227 TAGTTTATCCTTATATTTGGTAACTATATC---CATAACAGTAGGTGAGATAATCGGAGA 70283 |||| || || ||| | ||||| || | | | | ||| || || || | Sbjct 2393004 GAGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTT---TGATATCATTGGGGC 2392948 Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343 |||| ||| || || || | || | | ||| ||| || || ||| | Sbjct 2392947 AGGTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTG 2392888 Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 || ||||||| |||||| | || || | ||||| | || || ||||| || ||||| Sbjct 2392887 CTTCTTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTC 2392828 Query 70404 AGGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 |||||| ||||| || ||| || || | || ||||| Sbjct 2392827 TGGATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 2392789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908138850280