Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 >seq2 Length=3801342 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || ||||| ||||| || || ||||| ||| || |||| | |||||| Sbjct 3207089 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCG 3207148 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| ||||||||||||| || || || || | ||||||||||| Sbjct 3207149 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGA 3207208 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | || | ||||| | | |||||| || || || || | || Sbjct 3207209 ATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTT 3207268 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || || || || |||||| Sbjct 3207269 CCGGTGAGAGTCTTGACGAAAATCTGCATA 3207298 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 27014 ATTA-TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGT 27072 |||| || || || || | |||| ||||| ||||| || || || |||||||||| Sbjct 3206835 ATTAGTTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGT 3206894 Query 27073 AGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGAT 27132 |||| | |||| | || || ||||| || || || | || ||||| || || | Sbjct 3206895 AGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGT 3206954 Query 27133 CCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGG 27192 | || || | |||||| || || |||||| || | | | || | |||||| | | Sbjct 3206955 CTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGC 3207014 Query 27193 CTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||||||| | ||| |||| ||||| || || || || || ||||| |||||| Sbjct 3207015 TTTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCATA 3207070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | |||| | || || ||||| ||||||||| | || Sbjct 2556030 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 2555971 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 |||||||| || || || || | |||||| || || ||||||| || | | | || Sbjct 2555970 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 2555911 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | ||||| || || || || | || ||||| || || || || || Sbjct 2555910 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2555852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934001225624