Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7 158 1e-33 seq4 116 5e-21 >seq7 Length=2086428 Score = 158 bits (174), Expect = 1e-33 Identities = 312/459 (68%), Gaps = 22/459 (5%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 1171295 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 1171354 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || ||||||||||| | |||| | | ||| || |||| |||| Sbjct 1171355 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAAGAGCGACCAGGA 1171409 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||||||||||| ||||| | ||||||||| || | || Sbjct 1171410 GACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAG 1171469 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || ||||| | |||| ||||||||||| ||||||||| ||||| Sbjct 1171470 CGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCC---ACGATAA 1171526 Query 129963 CGTGA---ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 ||| | ||| | | | || | ||| || | |||||| || | | Sbjct 1171527 CGTCCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAG---CAGGCAAG 1171583 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| || |||||||||||| ||||| ||||| || || || ||||| ||||| | Sbjct 1171584 CAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGG 1171643 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | || |||||||||| |||||| || | ||| || || ||||||||||| | Sbjct 1171644 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAGGATCCGGAGAAGAAGATAC 1171703 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||| ||| ||||| || | |||||||| | | |||| Sbjct 1171704 CCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 1171742 >seq4 Length=2630140 Score = 116 bits (128), Expect = 5e-21 Identities = 576/909 (63%), Gaps = 26/909 (3%) Strand=Plus/Minus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| |||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 2394729 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 2394670 Query 118058 GATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 118114 || ||| |||||| | | | |||| | | |||||| | | ||||| ||||||| Sbjct 2394669 GACGGAGCCACCCTC---GGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 2394613 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 118171 | | |||| |||| || | ||||| || ||||||||||| ||| Sbjct 2394612 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 2394556 Query 118172 GCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 118231 || | ||||| || | ||||| ||||| |||||||| ||| |||||||| || Sbjct 2394555 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 2394496 Query 118232 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCT 118291 ||| || || |||||||| |||| || | |||||| || | ||| | | Sbjct 2394495 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 2394436 Query 118292 AATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATAT 118350 || | ||||||||||||||||| || || | || || | |||||| | Sbjct 2394435 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 2394377 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 2394376 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 2394317 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 ||| |||| || || || | ||| |||| || || || || || || | | Sbjct 2394316 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 2394257 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 || | ||| |||||| || || || | | || || || |||| | Sbjct 2394256 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 2394197 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | ||||| | |||||| || |||| ||||| || | ||| || ||| || || Sbjct 2394196 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGC---CT 2394140 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || || || |||| ||||||| | | | || || || | |||| Sbjct 2394139 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGTACCTGCA 2394080 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 118704 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 2394079 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 2394023 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 2394022 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 2393963 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 |||| || || | ||| || || || || |||| |||||| || || |||| ||| Sbjct 2393962 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 2393903 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| ||||||||||| |||||| | || | || ||||| || || | || ||||||| Sbjct 2393902 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 2393843 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 2393842 CATACCAGA 2393834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434604756120