Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05]
77 sequences; 37,128,894 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq17 105 6e-18
>seq17
Length=333254
Score = 105 bits (116), Expect = 6e-18
Identities = 334/516 (65%), Gaps = 29/516 (6%)
Strand=Plus/Plus
Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605
|||||| |||| |||||||| ||| | ||| |||| | ||| || | || |||
Sbjct 166248 GCTCGACATGGTCCAGGTAGACATGAGTATCACCCATGGCATGAACAAAGGTACCGGGAT 166307
Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665
|| |||| ||||||| ||||| | || | || ||||| ||||| |||||||
Sbjct 166308 GCAGGTCCACAGCATGAGCAATCATATGGGTCAAGAGGGCGTAGGAGGCAATATTGAACG 166367
Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC- 6724
|||| || | | | ||| | ||| || || |||||||||||| || | || |||
Sbjct 166368 GCACGCCGAGGGCGACGTCACACGAGCGCTGGTAGAGCTGGCAGTGGAGATGACCCTTCT 166427
Query 6725 --------------------GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCG 6764
| ||||||||| ||| || | || || || ||||| |
Sbjct 166428 GGTCTTGGCCATTGGGGTAGGAGACGTAGAACTGGGCGAACATATGACAAGGCGGGAGGG 166487
Query 6765 CCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGT 6824
||||| |||||| |||||||| |||| ||| | ||| | | ||| ||||
Sbjct 166488 CCATCTTCTTGAGATCGGCGGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGT 166547
Query 6825 TCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCC 6883
| ||||| ||| | || | | || |||||||| | || ||||||| |||||
Sbjct 166548 TATTCTTCAGCTTGTGCACGACCT-CGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCG 166606
Query 6884 GCTTCG-CTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942
| || | | | || ||||| ||||| ||||| | ||| ||||||||||| || || ||
Sbjct 166607 GTTTTGGCGTCGACG-TACTCGGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACC 166665
Query 6943 CAAGTCGCCCTCCTCCCGAGATGG--GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000
|| ||||| ||| || | ||| | || |||||| || || || || |||
Sbjct 166666 CAGATCGCCGACCT--CGCGGTGGTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCG 166723
Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGC 7036
| ||||||||||||| || || || ||||||
Sbjct 166724 TTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGAGC 166759
Score = 105 bits (116), Expect = 6e-18
Identities = 334/516 (65%), Gaps = 29/516 (6%)
Strand=Plus/Minus
Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368
|||||| || || || ||||||||||||| |||| || || || || |||||
Sbjct 166759 GCTCTCCGACCAAGGCGTCAAGATCTGGGACGGCAACGGCAGCCGTGAGTTCCTCGACAA 166700
Query 34369 GCGGGGGTTC--CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGG 34426
| || | ||| | || ||| ||||| |||| || || ||||||||||| |||
Sbjct 166699 GGTCGGCCTGGACCACCGCG--AGGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAATGG 166642
Query 34427 AGACACTTTGGGGCGGAGTATCGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGA 34485
| ||||| ||||| ||||| || | | | || | ||||| ||||||| || | ||
Sbjct 166641 CGCCACTTCGGGGCCGAGTA-CGTCGACGCCAAAACCGACTACACGGGACAAGGCGTTGA 166583
Query 34486 CCAGCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGA 34544
|||||| || | | || | ||| ||||| ||||| ||| | | ||| | |
Sbjct 166582 CCAGCTCGCCG-AGGTCGTGCACAAGCTGAAGAATAACCCCTTCGACCGCCGCATCATCA 166524
Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604
|| |||| |||||||| |||||| |||||| ||||| || || || | ||
Sbjct 166523 TGAGCGCCTGGAACCCCGCCGATCTCAAGAAGATGGCCCTCCCGCCTTGTCATATGTTCG 166464
Query 34605 GCCAATTCTACGTCGC---------------------GAATGGGGAGCTGTCCTGCCAGC 34643
||| ||||||||| | ||| || | || ||||||||
Sbjct 166463 CCCAGTTCTACGTCTCCTACCCCAATGGCCAAGACCAGAAGGGTCATCTCCACTGCCAGC 166404
Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703
|||| || || ||| | ||| | | | || ||||||||||| ||||| ||||| |
Sbjct 166403 TCTACCAGCGCTCGTGTGACGTCGCCCTCGGCGTGCCGTTCAATATTGCCTCCTACGCCC 166344
Query 34704 TGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGT 34763
| | || | ||||| ||||||| |||| || ||| || | || ||| |
Sbjct 166343 TCTTGACCCATATGATTGCTCATGCTGTGGACCTGCATCCCGGTACCTTTGTTCATGCCA 166284
Query 34764 TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799
|||| ||| | ||| |||||||| |||| ||||||
Sbjct 166283 TGGGTGATACTCATGTCTACCTGGACCATGTCGAGC 166248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261968547440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |