Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq17 105 6e-18 >seq17 Length=333254 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Plus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||||| |||| |||||||| ||| | ||| |||| | ||| || | || ||| Sbjct 166248 GCTCGACATGGTCCAGGTAGACATGAGTATCACCCATGGCATGAACAAAGGTACCGGGAT 166307 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || |||| ||||||| ||||| | || | || ||||| ||||| ||||||| Sbjct 166308 GCAGGTCCACAGCATGAGCAATCATATGGGTCAAGAGGGCGTAGGAGGCAATATTGAACG 166367 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC- 6724 |||| || | | | ||| | ||| || || |||||||||||| || | || ||| Sbjct 166368 GCACGCCGAGGGCGACGTCACACGAGCGCTGGTAGAGCTGGCAGTGGAGATGACCCTTCT 166427 Query 6725 --------------------GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCG 6764 | ||||||||| ||| || | || || || ||||| | Sbjct 166428 GGTCTTGGCCATTGGGGTAGGAGACGTAGAACTGGGCGAACATATGACAAGGCGGGAGGG 166487 Query 6765 CCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGT 6824 ||||| |||||| |||||||| |||| ||| | ||| | | ||| |||| Sbjct 166488 CCATCTTCTTGAGATCGGCGGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGT 166547 Query 6825 TCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCC 6883 | ||||| ||| | || | | || |||||||| | || ||||||| ||||| Sbjct 166548 TATTCTTCAGCTTGTGCACGACCT-CGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCG 166606 Query 6884 GCTTCG-CTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 | || | | | || ||||| ||||| ||||| | ||| ||||||||||| || || || Sbjct 166607 GTTTTGGCGTCGACG-TACTCGGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACC 166665 Query 6943 CAAGTCGCCCTCCTCCCGAGATGG--GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000 || ||||| ||| || | ||| | || |||||| || || || || ||| Sbjct 166666 CAGATCGCCGACCT--CGCGGTGGTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCG 166723 Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGC 7036 | ||||||||||||| || || || |||||| Sbjct 166724 TTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGAGC 166759 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Minus Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368 |||||| || || || ||||||||||||| |||| || || || || ||||| Sbjct 166759 GCTCTCCGACCAAGGCGTCAAGATCTGGGACGGCAACGGCAGCCGTGAGTTCCTCGACAA 166700 Query 34369 GCGGGGGTTC--CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGG 34426 | || | ||| | || ||| ||||| |||| || || ||||||||||| ||| Sbjct 166699 GGTCGGCCTGGACCACCGCG--AGGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAATGG 166642 Query 34427 AGACACTTTGGGGCGGAGTATCGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGA 34485 | ||||| ||||| ||||| || | | | || | ||||| ||||||| || | || Sbjct 166641 CGCCACTTCGGGGCCGAGTA-CGTCGACGCCAAAACCGACTACACGGGACAAGGCGTTGA 166583 Query 34486 CCAGCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGA 34544 |||||| || | | || | ||| ||||| ||||| ||| | | ||| | | Sbjct 166582 CCAGCTCGCCG-AGGTCGTGCACAAGCTGAAGAATAACCCCTTCGACCGCCGCATCATCA 166524 Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604 || |||| |||||||| |||||| |||||| ||||| || || || | || Sbjct 166523 TGAGCGCCTGGAACCCCGCCGATCTCAAGAAGATGGCCCTCCCGCCTTGTCATATGTTCG 166464 Query 34605 GCCAATTCTACGTCGC---------------------GAATGGGGAGCTGTCCTGCCAGC 34643 ||| ||||||||| | ||| || | || |||||||| Sbjct 166463 CCCAGTTCTACGTCTCCTACCCCAATGGCCAAGACCAGAAGGGTCATCTCCACTGCCAGC 166404 Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703 |||| || || ||| | ||| | | | || ||||||||||| ||||| ||||| | Sbjct 166403 TCTACCAGCGCTCGTGTGACGTCGCCCTCGGCGTGCCGTTCAATATTGCCTCCTACGCCC 166344 Query 34704 TGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGT 34763 | | || | ||||| ||||||| |||| || ||| || | || ||| | Sbjct 166343 TCTTGACCCATATGATTGCTCATGCTGTGGACCTGCATCCCGGTACCTTTGTTCATGCCA 166284 Query 34764 TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 |||| ||| | ||| |||||||| |||| |||||| Sbjct 166283 TGGGTGATACTCATGTCTACCTGGACCATGTCGAGC 166248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261968547440