Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214955.1_202017-07-05] 77 sequences; 37,128,894 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=3801342 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 ||||| | ||||| || || || || || || || || || || | || || || Sbjct 3207308 AAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGA 3207367 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCT 39186 |||| || ||||| || || || || || | |||||||||||||| ||| | || ||| Sbjct 3207368 CCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCT 3207427 Query 39187 TTGTCCATGATTTT-CTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCG 39244 |||||| |||||| || || | ||| | | | |||||||| ||||| || || | | Sbjct 3207428 TTGTCCTGGATTTTGCTCTT--AACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGG 3207485 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAAC 39272 ||||| | ||||| || || || || || Sbjct 3207486 TGATAGTCTTTCCAGTGAGGGTCTTCAC 3207513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545196898301