Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20oryzae_20[genbank_20GCA_5F002214965.1_202017-07-05] 93 sequences; 36,974,910 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 125 2e-23 seq15 93.3 9e-14 >seq6 Length=2060378 Score = 125 bits (138), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | ||||||| |||| || ||| ||| ||||||||||| | |||| Sbjct 1145618 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTTCTTGGCATGAACTCC-AACT 1145561 Query 230469 T-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| |||||||| | | || || ||||| || | | Sbjct 1145560 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACA 1145501 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | ||| | | ||||| |||| || ||||| ||| || || || |||| Sbjct 1145500 AGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGA 1145441 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| |||| || |||| ||||||||||| Sbjct 1145440 CCAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 1145391 >seq15 Length=1366461 Score = 93.3 bits (102), Expect = 9e-14 Identities = 432/671 (64%), Gaps = 30/671 (4%) Strand=Plus/Plus Query 281532 CGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCG 281591 ||||| | |||||| |||||||| | ||| || || | || ||| | | ||| ||| Sbjct 905184 CGCTTAAGGTTGTCCACGATGTCCTCGGGGTTGTAGTTAGGGATGGATGAACTCCAGCCG 905243 Query 281592 GTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCT 281651 || || ||||| | ||| || |||| || | || | | || || || ||| Sbjct 905244 GTGCCGATACCGTCAGCACCGTTAACCAGGATCATGGGAACGACGGGCACGTAGATTTCC 905303 Query 281652 GGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTATCGACG 281711 || || ||||| ||||||||||| | || | || || |||||| | | | Sbjct 905304 GGCTCGATTTTTTCACCATCATCCTCGTTGTAAGTAAGTAGAGGATCATCATGAGCATGG 905363 Query 281712 AAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCT 281771 || || |||| | || ||| ||| ||||||| | ||||| || |||| Sbjct 905364 AAGACACGTCGAGCGAACGGCGACAGGCGAGTGTAGATATAACGAGCACTGGCACAGTCT 905423 Query 281772 TTACCACCCTGCAGCCTCGAC--CCAAACTGACCCTCCGGCAACAACCAGTTAATGTTAT 281829 |||||||| || | ||| ||||| | ||| ||| || ||||| | || | Sbjct 905424 GATCCACCCTGGAGAC--GACTACCAAAGTTACCACTGGGCTCCAGACAGTTTACATTGT 905481 Query 281830 TGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGT 281889 || ||||||| | ||| |||||| |||||| ||| ||| || || | ||||||| Sbjct 905482 TGGACCCGACGAAGCTCTGTGCCAGGCCGACGATGGTCTGCTGCAGGGAGATGTCACCGT 905541 Query 281890 GGTGATAGGCGCTGTGTT--CGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGA 281947 | ||||| ||| || | | | ||| | ||| || | | ||||||| || Sbjct 905542 GTTGATA--CGCAGTCATACCCGAAACGTGACCCGCTAATTCGACCACCTTCATATCCTT 905599 Query 281948 TGTCAAGTTGCGTTTGAAAGCGCAA-TATAAT--ACTTTTCGTTGAGAAGGCTTGAAACC 282004 ||| ||||||| |||| ||| ||||| || || |||||| ||||||| || Sbjct 905600 CTTCAGGTTGCGTCGGAAA---CAAGTATAAAGAACCTTACGTTGACCGGGCTTGAGGCC 905656 Query 282005 ATCAACGACAGACGGAATGCTGCGTTCCAGGTCATA--CCGCGA----GAACAAAATAAG 282058 ||| ||||| || ||||| || || || ||| |||| | ||| | || || Sbjct 905657 ATCCACGACCGAAGGAAT----CGATC--GGACATTGTCCGCCATACTGAATAGGATGAG 905710 Query 282059 TTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTC-AAGTTGGTTTC 282117 ||||||| |||||||||| | || || || | ||| || ||| |||| | Sbjct 905711 CTCCTTGTTGATGAAGTCGGTGTATGAAATCTTGGACACTGAGTGATCCAAGAAGGTT-C 905769 Query 282118 CCGGCTCGTAT-GCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAA 282176 |||||| | || | || || |||||||||||| || |||||| ||||| ||||| | Sbjct 905770 CCGGCTTGAATTGACG-CAGCCACTCCTTGCGCTCATCGGCCTTCTTCTTGGAGAAAGCA 905828 Query 282177 CGATCGATGAG 282187 | || || || Sbjct 905829 AGCTCAATCAG 905839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822739536590